Protein

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Genbank accession
WPK42211.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,88
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MIKNNVVTGRKGGSSKPHTPQEMEDNLISINKIKVLLAVSDGEVDDNFSLKDLYLNDVPVIAPSGEVNYEGVKAEFRPGTQTQDYIKGFNDTAAEFTVGRELKTTTPYVISVTNKQLSAVRVKILMPRGVTTKENGDMVGVVVKWAVDMAVDGGSYQEVLSDVIDGKTISGYDKTKRIDLPSFNSQVLLRVRRVTPDSNNARVVDAISIQSYAEVIDAKFRYPLTGLVYVEFNSELFQQIPRISTKKKWKLINVPSNYNPDLREYNGTWDGSFKKAWSNNPAWVLYDLITNQRYGLDQRELGIAVDKWSLYDAGQYCDQKVPDGHGGTEPRYLCDVVIQSQVEAYNLVRDICSIFRGMSFWNGESLSIVIDRPREASYIFTNDNVVDGSFAYTFASEKSMYTTCNVTFDDEQNMYSQDIEGVFDLNASLRFGHNPTSITAIGCTRRSEANRRGRWVLKTNLRSTTVSFATGLEGMIPMIGDVVAIADNFWSSNLTLSLSGRVMEVSGLQVFTHFKVDARAGDFIIVNKADGNPVRRTISKVSADGKTIELNVGFGFDVQPNTVFAIDRTDVALQQYVVTGITKGDGDDEFTYSITAVEYDPNKYDEIDYGVNIDDRPTSIVDPDNMQPPKNIVVSSYSRIVQGMSVETMVVGWDKVQYASKYDVQWRKDNGNWMNVPRTASSEVEVEGIYAGNYHVRVRSISSGGNTSPWSEVVSVGLTGKIGKPDKPTVITASDDQVFGIRVKWGFPEGSGDTAYTELQQIPDNGAGGHTGEENASLLTMIPYPQYEYWHSTLPAGYVNWYRARLVDRIGNASDWSDIVRGMASDDVESIIGEIKVDIENSEGFKYLQQNAIESNGAIQAQAESILENALANDTDVRRMTKENGKRKAEYVKAVNLIADETQARVEALTQLKAQIDDEVVASITEVQTALATETEARTTADTALSAQIGDTQAALNEKLDSWVDAESAGAQYGVKLGLKYNGVEYSAGMSMELVGTGGNVRSQFIFDANRFAISNGIGSGSGQWQLPFVVENGNVIIQSAVIGDGSISNAKIGNFIQSNNYVAGSTGWRIDKSGNAEIRGKLYASSGEFAFNGTNNTVQINGNGITVNLPGGGRIVVGTF
Physico‐chemical
properties
protein length:1121 AA
molecular weight: 123108,99130 Da
isoelectric point:4,86709
aromaticity:0,09010
hydropathy:-0,32337

Domains

Domains [InterPro]
DC_0014
STR
1–1120
DC_0014
IPR053171
Unmapped
3–881
IPR053171 Coil IPR015406
IPR055385
ATT
93–218
IPR055385 IPR032876 IPR036116
IPR013783
STR
627–721
IPR013783
IPR003961
STR
628–722
IPR003961
IPR003961
STR
628–716
IPR003961
IPR003961
STR
647–715
IPR003961
WPK42211.1
1 1121
Architecture
STR
ATT
STR
ATT
STR
STR 1-92 | ATT 93-218 | STR 219-339 | ATT 340-502 | STR 503-1120 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WPK42211.1
1 1121
Domain Start End Length (AA) Confidence
N-terminal 1 504 504 0,8984
Central domain 505 1058 555 0,0629
C-terminal 1059 1121 62 0,7836
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-504
Central
505-1058
C-terminal
1059-1121

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB-EcoS-XT34
[NCBI] 		3093888 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WPK42211.1 [NCBI]
Genbank nucleotide accession
OR767160.1 [NCBI]
CDS location
range 25865 -> 29230
strand +
CDS
ATGATTAAAAATAATGTAGTGACGGGCCGAAAGGGTGGCAGCAGCAAGCCGCATACCCCACAGGAGATGGAAGATAACCTGATCTCAATCAACAAGATTAAGGTTTTGCTCGCCGTTAGTGATGGCGAGGTTGATGATAATTTCTCATTAAAGGACTTGTATCTTAATGATGTTCCTGTAATTGCACCTTCCGGAGAGGTTAACTATGAAGGCGTAAAAGCTGAGTTCCGCCCAGGTACGCAGACACAGGATTACATCAAAGGCTTCAACGACACGGCGGCTGAGTTCACTGTTGGTCGTGAATTGAAAACAACGACTCCTTACGTGATCTCGGTAACGAATAAGCAGCTATCAGCAGTCCGCGTAAAAATCCTGATGCCTCGCGGCGTTACCACGAAAGAAAACGGCGACATGGTTGGCGTGGTCGTGAAGTGGGCCGTAGATATGGCGGTTGATGGAGGGAGCTACCAGGAGGTTTTATCTGACGTCATCGATGGTAAGACGATTAGCGGATATGACAAGACAAAGCGTATTGACTTGCCGTCGTTTAATAGCCAAGTCCTGCTTCGGGTTCGTCGTGTTACTCCTGATTCGAATAATGCAAGAGTTGTTGATGCGATCAGCATTCAGTCATATGCGGAAGTTATTGACGCTAAATTCCGTTATCCTCTGACTGGTCTTGTTTACGTTGAGTTTAACAGCGAGCTGTTCCAGCAGATCCCAAGAATTAGCACGAAAAAGAAATGGAAGCTCATCAACGTTCCGAGCAACTATAATCCAGATCTTCGCGAGTATAACGGCACGTGGGATGGTAGCTTTAAAAAAGCATGGTCAAATAATCCGGCGTGGGTGCTTTATGATTTGATCACCAATCAGCGCTACGGACTCGACCAACGGGAATTGGGGATTGCAGTTGATAAGTGGTCACTATATGACGCTGGTCAATACTGCGACCAGAAAGTGCCAGACGGTCACGGCGGAACAGAACCTCGCTATCTTTGCGATGTGGTTATTCAATCTCAGGTTGAAGCGTACAATCTGGTGCGAGATATTTGCTCAATATTCAGAGGGATGAGCTTCTGGAACGGCGAGAGCCTTTCAATTGTCATCGACAGACCTAGAGAGGCGTCGTATATTTTCACTAACGATAACGTCGTTGATGGCTCATTTGCCTATACGTTCGCAAGTGAAAAAAGCATGTACACAACCTGCAACGTCACGTTCGACGACGAGCAGAACATGTACAGCCAGGACATTGAAGGGGTATTCGACCTTAACGCCTCATTACGCTTCGGTCATAATCCGACAAGCATCACGGCGATCGGGTGTACTCGACGCAGTGAAGCGAATCGACGGGGCCGTTGGGTTCTCAAAACAAACCTTCGCAGCACGACGGTGAGTTTTGCTACTGGCCTTGAGGGTATGATTCCGATGATTGGCGACGTGGTAGCAATCGCTGATAACTTCTGGTCAAGTAACCTGACGCTTTCGTTATCAGGTCGTGTGATGGAAGTGTCAGGCCTGCAAGTGTTCACACACTTTAAGGTCGATGCGCGCGCTGGTGATTTCATTATCGTGAACAAGGCTGACGGAAATCCGGTGCGCCGGACGATTTCAAAAGTTTCTGCGGACGGGAAAACCATTGAGCTTAACGTTGGATTCGGTTTTGATGTTCAACCCAACACAGTGTTCGCAATCGACCGCACTGATGTGGCCTTGCAGCAATACGTTGTAACCGGAATAACGAAGGGCGACGGAGACGATGAGTTCACGTACAGCATTACGGCAGTTGAATACGATCCGAACAAATACGACGAGATTGACTACGGCGTAAATATTGATGACCGACCAACCAGTATTGTAGATCCTGACAACATGCAGCCACCTAAAAACATTGTCGTTTCATCATACTCTAGAATTGTGCAGGGAATGAGCGTAGAAACAATGGTGGTAGGATGGGATAAAGTTCAGTACGCAAGCAAGTACGATGTGCAGTGGCGAAAGGATAACGGCAACTGGATGAACGTGCCGCGCACAGCAAGCTCAGAGGTTGAAGTGGAAGGTATTTATGCGGGTAATTATCACGTACGCGTAAGGAGTATCTCAAGCGGTGGAAACACGTCTCCATGGTCTGAAGTTGTCAGCGTCGGATTGACGGGTAAGATTGGGAAGCCAGATAAACCAACAGTCATAACTGCATCTGACGACCAGGTGTTTGGGATACGGGTTAAATGGGGATTCCCTGAAGGCTCTGGAGATACCGCGTACACTGAGTTGCAGCAGATACCAGATAATGGAGCCGGAGGTCACACAGGCGAGGAGAATGCAAGCCTGTTAACAATGATACCATACCCTCAGTACGAGTACTGGCACTCTACACTACCGGCAGGATATGTGAACTGGTACAGGGCAAGATTGGTAGACAGGATTGGTAACGCCTCTGACTGGTCTGACATTGTTCGCGGAATGGCAAGCGATGACGTTGAGTCAATAATTGGAGAAATAAAGGTTGATATCGAGAATTCCGAGGGGTTTAAGTACCTACAGCAGAACGCCATTGAGTCAAACGGAGCTATTCAGGCGCAGGCGGAATCAATTCTTGAAAACGCACTTGCAAACGACACTGACGTGCGACGAATGACCAAGGAAAACGGCAAGCGTAAGGCTGAATACGTTAAGGCGGTGAATCTTATTGCTGATGAAACTCAGGCTCGCGTAGAGGCTCTCACGCAGCTTAAAGCACAGATTGATGATGAGGTTGTAGCTTCCATAACTGAAGTTCAGACGGCACTAGCCACCGAAACGGAAGCTAGGACTACTGCCGACACTGCTTTAAGCGCTCAGATTGGCGACACGCAGGCCGCACTGAATGAAAAACTTGACTCATGGGTAGATGCAGAATCAGCTGGCGCTCAGTACGGCGTTAAATTGGGCCTCAAATACAATGGGGTTGAATATAGCGCAGGGATGAGCATGGAACTTGTTGGCACTGGTGGGAATGTTCGCAGTCAATTCATTTTTGACGCAAACAGATTCGCGATCAGTAACGGTATTGGCTCTGGTTCCGGTCAGTGGCAGCTCCCCTTCGTTGTAGAGAACGGAAACGTAATCATCCAAAGCGCGGTAATTGGCGATGGATCAATCAGCAACGCGAAGATTGGTAACTTCATTCAGTCCAATAACTACGTAGCTGGAAGTACGGGATGGAGGATTGATAAGTCTGGTAACGCTGAGATTCGAGGTAAACTGTACGCCAGCAGTGGTGAATTCGCCTTCAACGGAACAAACAATACGGTACAGATTAACGGAAACGGAATCACTGTTAACTTACCAGGAGGAGGAAGAATTGTTGTGGGTACGTTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
9c7b6f91cd217216f375c64897decebdd18395d57d67d24c3fa80ae14fa05448
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7870
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50