Protein

View in Explore
Genbank accession
QIN98183.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,89
Protein sequence
MAIYRTGQASMDAQGYITGYETKWREQLTLIRPGATIFFIDAPFQAAVISEVISDTQIRAITTGGAEIGRSNYIILLHDSITVDGLAQDVAETLRYYQSKETQIEEAIEFFKNFDLKQLQDLANQVKSDAEKTANDRAATEQLKNNTQQIKDSAVAETNQIKSDTDAIKAQTQQIKDSAIIETEAIKQEAFDARDQAELARDTAGNHAVEANNAKAGAETARDEARQWAQQVNPENLVHKDQNLKGLSDIDEARRTLSIDSFFQDYVHTILYSRNREYRLVIRDDGLLVFQRDVSGSGSFETVPLAISSGGTGAIDANGIRNNIGLGEKHAPKFLSLNVENETENATTANAGIYHSKLKNTQGEDIGSSQSYFETQVGVGKHTIGVFHNGSSQYYQFNENGTFSGAKSISLAPGAGIYADGNERNASQLFSIMNPPINTWTGVSRYNWYDDYAIAGLIRRGDTHVESFGIELYQAGIQSYMHKFYPDGRTHSAQYTGKTQQMGWDDPNYWGNALVWGEIVANNDGGWAPGLSWGTQSTGGYPIRATWGLIPQGNNAWPFCSLRLRGDGNFFCNFQFQPASNDITTWSSSGNFIFQKAANSDRDLKHDIIYTDGKESYDRVMQWLPTMFKYNGSNIQRFGMIAQDLLKIDPEYVKLIPGGDIFADVIGVNDEGEEYVDRQIVVDKADDTLALDNNVIMADMACAMVYMGGMIENQQKEIDELKAAVAALLNK
Physico‐chemical
properties
protein length:731 AA
molecular weight: 81022,74590 Da
isoelectric point:4,78905
aromaticity:0,09713
hydropathy:-0,47989

Domains

Domains [InterPro]
DC_0253
STR
2–731
DC_0253
Coil
Unmapped
116–136
Coil IPR030392 Coil
IPR030392
CHP
600–718
IPR030392
QIN98183.1
1 731
Architecture
STR
STR 2-731
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage slyngel
[NCBI] 		2713321 Uroviricota > Caudoviricetes > Drexlerviridae > Hanrivervirus > Hanrivervirus slyngel
Host Salmonella enteritidis
[NCBI] 		149539 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIN98183.1 [NCBI]
Genbank nucleotide accession
MT074433.1 [NCBI]
CDS location
range 28424 -> 30619
strand -
CDS
ATGGCAATTTACAGAACCGGACAGGCGTCAATGGACGCTCAAGGTTATATAACTGGATACGAAACGAAATGGCGAGAGCAACTAACGCTCATTCGTCCTGGTGCAACAATCTTTTTCATTGATGCACCATTCCAAGCGGCTGTGATCAGTGAAGTTATCAGCGATACACAAATCCGCGCCATCACAACTGGCGGCGCTGAAATTGGGCGAAGCAACTACATTATTTTGCTGCATGACTCAATCACTGTTGATGGCCTGGCGCAAGATGTTGCGGAAACGCTGCGTTACTATCAAAGCAAAGAAACTCAGATCGAGGAAGCTATTGAATTTTTCAAAAACTTTGACCTAAAACAGTTGCAAGATCTGGCTAATCAGGTTAAAAGTGATGCAGAGAAAACGGCCAATGATCGTGCTGCTACTGAACAACTGAAAAACAACACTCAACAGATAAAGGATTCTGCTGTTGCTGAAACAAACCAGATTAAATCAGACACTGACGCAATCAAGGCGCAAACGCAACAGATTAAAGATTCAGCTATAATCGAAACGGAAGCTATTAAACAGGAGGCTTTTGATGCTCGCGATCAGGCTGAACTGGCGCGCGATACTGCTGGCAATCATGCCGTTGAGGCAAATAATGCAAAGGCTGGCGCTGAAACTGCGCGTGATGAAGCTCGCCAGTGGGCGCAACAGGTAAATCCTGAAAATCTAGTGCATAAGGATCAGAACCTTAAAGGTCTTTCTGACATTGATGAAGCTCGCCGGACGCTTAGCATTGATTCATTTTTTCAGGACTACGTGCATACTATCTTGTACTCTAGAAATAGAGAATATAGGCTTGTTATCAGAGATGATGGTCTTCTTGTTTTCCAGAGGGACGTATCAGGGTCTGGGTCATTTGAAACTGTTCCTTTAGCTATTTCTTCTGGTGGCACTGGAGCTATTGACGCAAATGGCATCAGAAACAATATAGGACTTGGCGAAAAACATGCACCAAAGTTTTTGAGTCTTAATGTTGAAAACGAAACGGAAAATGCAACTACTGCAAACGCAGGTATATACCATTCAAAACTAAAGAATACACAAGGTGAAGATATTGGATCTTCTCAGTCTTATTTTGAGACTCAAGTAGGCGTAGGAAAGCATACAATAGGAGTATTTCATAATGGGTCATCACAGTATTATCAGTTTAATGAAAATGGTACTTTTTCAGGAGCGAAAAGTATTTCCTTAGCTCCTGGGGCTGGTATTTATGCAGATGGGAATGAACGCAATGCGTCGCAATTGTTTTCAATTATGAATCCACCAATCAACACATGGACTGGTGTAAGTCGTTACAACTGGTATGACGATTACGCTATCGCTGGTTTAATCAGAAGAGGCGACACACACGTTGAATCTTTTGGAATAGAATTGTATCAAGCAGGGATACAGTCCTATATGCACAAGTTTTACCCTGACGGCAGAACGCATTCTGCTCAATACACTGGCAAAACTCAACAAATGGGGTGGGACGATCCAAATTATTGGGGTAATGCTCTTGTTTGGGGTGAGATTGTTGCTAACAATGACGGTGGTTGGGCGCCAGGTCTTTCATGGGGAACACAGTCCACTGGTGGCTATCCTATTCGCGCAACTTGGGGTCTTATTCCACAAGGAAATAATGCATGGCCTTTTTGCTCGTTAAGGCTTCGTGGTGATGGTAATTTTTTCTGTAACTTCCAGTTTCAGCCAGCCTCAAACGATATAACCACATGGTCATCAAGTGGAAATTTCATTTTTCAAAAGGCAGCTAACTCTGACAGAGATTTAAAGCACGATATAATTTATACAGATGGAAAAGAAAGCTATGATCGCGTTATGCAGTGGCTTCCGACAATGTTTAAATACAATGGAAGCAACATCCAGCGATTCGGGATGATAGCTCAGGATCTGCTAAAAATAGATCCTGAATATGTAAAGCTAATACCTGGCGGGGACATTTTTGCAGATGTTATAGGCGTTAATGATGAAGGTGAAGAATATGTAGATCGTCAAATTGTGGTTGACAAAGCAGATGATACGCTTGCTCTTGACAACAACGTGATCATGGCTGATATGGCTTGCGCTATGGTTTACATGGGGGGAATGATCGAAAACCAGCAAAAGGAGATAGACGAGTTAAAGGCGGCTGTTGCTGCACTGCTCAATAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
709a446fe7f2988dbcb4130914aa75e1867430545299cebd607e4d446efdf778
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6742
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A New High-Throughput Screening Method for Phages: Enabling Crude Isolation and Fast Identification of Diverse Phages with Therapeutic Potential Olsen,N.S., Hendriksen,N.B., Hansen,L.H. and Kot,W. 2020 — GenBank