Protein

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Genbank accession
QIN95153.1 [GenBank]
Protein name
tail tubular protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,60
Protein sequence
MGLVSQSVKNLKGGISQQPDILRFPNQGAQQINGWSSETQGLQKRPPTKFIKRLGAPGSWGAKPLVHLVNRDAVEQYYMVFTGGGVAVVDLNGNSYQVRGYDGYANCPDPRGDLRLITVADYTFVVNRRTVVQMGSELTHAGYRNPQTRALVACRGGQYGRTLVVEVLIDVTWVKLAEHALPSGIGDNGQAAADMVKMVDAQYIIDILVAQVNTNGAPWKITAAPGPGYMLLHRDDGGSFQGIRTKDGYADQLINGFIYQVQSFNKLPAQAPEGFLVEITGEATRSGDNYWVRYDGLGRVWKETVKPGIIAGLNRNTMPRGLVRAADGQFDWKVLDWNNRASGDNETNPPPSFVDGTINDVFFFRNRLGFLSGENVIMSRSSRYFNFFPPSVASLSDDDPLDIAVSHNRISILKYAVPFSEQLLLWSDQAQFVLSSQGILSPKTVELNLTTEFDVQDTARPFGIGRGVYFSAPRAAYTSLKRYYAVQDVSDVKNAEDVSAHVPSYIENRVFNIHGSGTENYVTLLSDGAPGIVYLYKFLYMAEDIAQQSWSHWEFGTQVNVLGCASIGSYMYLLMDRPEGIVLERMEFTAFTKDFPVEPYRTYIDGKVTTVCSEFDEDLFLSYINLSSLYGGAPGSQESFWTIDTDGVGQQHSPPRGGWQGDPRITLQGDQRGKTYIVGRSYTFLYEFSKFLIKQTADDGTTATEDIGRLQLRRAWLNYESSGSFEINVNNNGGRNTDNDFVYVMAGGRLGAEVRLGELNLGTGQFKFPVTGNAQNQRVTIVSDTPNPLNVIGCGYEGNYIRRSSGI
Physico‐chemical
properties
protein length:807 AA
molecular weight: 89261,05880 Da
isoelectric point:5,51380
aromaticity:0,11152
hydropathy:-0,29851

Domains

Domains [InterPro]
IPR058003
TTP
1–807
IPR058003
QIN95153.1
1 807
Architecture
TTP
TTP 1-807
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QIN95153.1
1 807
Domain Start End Length (AA) Confidence
N-terminal 1 145 145 0,9945
Central domain 146 356 212 0,0572
C-terminal 357 807 450 0,1145
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-145
Central
146-356
C-terminal
357-807

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage BIM BV-46
[NCBI] 		2713155 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas fluorescens
[NCBI] 		294 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIN95153.1 [NCBI]
Genbank nucleotide accession
MT094431 [NCBI]
CDS location
range 23988 -> 26411
strand +
CDS
ATGGGTCTGGTTAGTCAGTCCGTAAAGAACCTGAAGGGTGGCATTAGCCAACAGCCGGACATCCTCCGGTTTCCCAATCAGGGTGCGCAACAAATCAACGGCTGGTCGAGCGAGACCCAAGGTCTTCAGAAGCGACCGCCAACGAAGTTCATTAAGCGTCTCGGGGCACCGGGTTCGTGGGGCGCTAAGCCTCTCGTCCACTTGGTCAACCGTGATGCGGTCGAACAGTATTACATGGTGTTCACTGGTGGTGGCGTTGCCGTGGTGGACCTTAACGGAAACAGCTATCAGGTTCGTGGCTACGATGGTTATGCCAACTGCCCGGACCCTCGTGGTGACCTGCGCCTGATCACTGTGGCCGACTACACGTTCGTTGTGAATCGCCGCACCGTTGTCCAGATGGGCAGCGAGCTGACTCACGCCGGATACCGCAACCCACAGACCCGTGCCCTCGTGGCATGTCGTGGTGGTCAGTATGGCCGGACGTTGGTCGTTGAGGTCCTTATCGACGTGACGTGGGTGAAGCTGGCCGAACACGCACTGCCCTCAGGTATTGGCGACAATGGTCAGGCTGCTGCTGACATGGTGAAGATGGTTGATGCGCAATACATCATTGACATCCTCGTGGCTCAAGTGAACACGAACGGCGCACCATGGAAGATCACCGCTGCGCCAGGTCCGGGCTACATGCTCCTACACCGTGACGATGGTGGTTCATTCCAAGGCATCCGCACCAAGGACGGCTATGCTGACCAGTTGATCAACGGCTTCATCTATCAGGTCCAGTCTTTCAATAAGTTGCCCGCTCAGGCCCCTGAAGGTTTCCTTGTGGAGATCACCGGGGAAGCCACACGCTCAGGCGACAACTACTGGGTCCGTTATGATGGCCTTGGGCGAGTCTGGAAGGAGACCGTTAAGCCGGGGATCATCGCGGGCCTGAACCGTAACACCATGCCTCGTGGTCTGGTCCGTGCGGCTGACGGTCAGTTCGACTGGAAGGTACTCGACTGGAACAACCGTGCGAGCGGTGACAACGAGACCAACCCGCCGCCTTCCTTCGTGGACGGTACGATCAACGACGTGTTCTTCTTCCGTAACCGTTTGGGGTTCCTCTCAGGCGAGAACGTGATCATGAGCCGGTCGTCGCGGTACTTCAACTTCTTCCCACCAAGCGTGGCGAGCCTGTCCGATGATGACCCTCTGGACATCGCGGTATCCCACAACCGTATCTCCATCCTCAAGTACGCCGTACCGTTCTCTGAACAGTTGCTGCTGTGGTCCGATCAAGCTCAGTTCGTGCTGTCCTCTCAGGGCATCCTGTCTCCCAAGACGGTCGAGCTGAACCTGACCACTGAGTTCGACGTACAGGACACCGCGCGGCCTTTCGGTATCGGGCGTGGTGTGTACTTCTCGGCCCCTCGTGCGGCCTATACGAGCCTCAAGCGTTACTACGCAGTGCAGGACGTATCGGACGTGAAGAACGCCGAGGACGTATCAGCGCACGTTCCAAGCTACATTGAGAACCGGGTGTTTAACATCCACGGCTCGGGTACTGAGAACTATGTGACCCTGCTGTCTGACGGCGCTCCGGGTATCGTGTACCTGTACAAGTTCCTCTACATGGCCGAAGACATTGCGCAACAGTCTTGGAGTCACTGGGAGTTCGGTACTCAGGTCAACGTGCTGGGCTGCGCTTCGATTGGCTCCTACATGTACCTCCTGATGGATCGCCCTGAAGGGATCGTACTGGAGCGCATGGAGTTCACGGCTTTCACCAAGGACTTCCCTGTGGAGCCTTACCGGACCTACATCGACGGCAAAGTGACAACCGTGTGCAGTGAGTTCGATGAAGACTTGTTCTTGTCGTACATCAATCTGTCCAGCCTGTATGGTGGCGCACCGGGTTCACAGGAATCCTTCTGGACTATCGACACGGATGGCGTAGGGCAACAACACTCGCCTCCGAGAGGTGGCTGGCAGGGTGACCCACGGATCACTCTACAAGGCGACCAGCGGGGCAAGACGTACATCGTTGGCCGTTCCTACACATTCCTCTATGAGTTCTCGAAGTTCCTGATCAAGCAAACCGCTGATGATGGGACCACGGCCACTGAGGACATCGGTCGGTTGCAGCTCCGTCGAGCTTGGCTGAACTATGAGTCTTCGGGTTCGTTCGAGATCAACGTGAACAACAACGGTGGCCGCAACACGGACAACGACTTCGTGTACGTCATGGCCGGTGGCCGACTCGGTGCTGAGGTTCGCCTCGGTGAACTGAATCTCGGGACTGGTCAATTCAAGTTCCCGGTGACGGGTAACGCCCAGAACCAACGGGTGACCATCGTGAGCGACACACCGAACCCACTCAACGTGATCGGCTGTGGCTATGAGGGTAACTACATCCGTCGATCCAGCGGTATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
adcafdc0fe57f3373066a50cd1a99227d7c82fce4bfbf86b6a8b692e11a0e0b0
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2911
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Biopesticide 'Multiphage' based on phages of phytopathogenic bacteria Pseudomonas syringae and Pseudomonas fluorescens used in agriculture to control plant diseases Pilipchuk,T.A., Gerasimovich,A.D., Ananyeva,I.N., Kolomiets,E.I., Popov,F.A. and Novik,G.I. 2015 — GenBank