Protein

Genbank accession
AJD81969.1 [GenBank]
Protein name
short tail fiber
RBP type
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MSQNNINHISDSSSYVTFNPTGTQWPVTVVNVQQALANIGSWATISGGLPIASETVAGISRIATNAEILAGTDDTTIVTPKKLNERLQYPQATEIQFGIVKLSTIAETNAFANDRNVITPYKLGNVFNTITANTTRFGTVKLTSSVQAQAGTDNTTATTPARVLEMINKFAIVPGDYAPATETSIGLVYLANTAQVAAGDIRAGYAVSPYSFKNTQASTVQVGTTRLATLAELKNGESNLSVSPSILQQMDANNLTKGLVKLSVNPSTAVGTALAANANVVWKTQKINGIAFTGDINVTAEQVNAYSKPEADGRFKPINAPNGTKVVINGADNIGWANMEVARCPGDTGTYTAVINLHVKFTQNGDGQQNRYLNFNVLHNGGINQQRYVNLFNAKGGSKGHYWGFEGFTTTVIRIGPLAPNSVIVLQPTANHAFQYWGYSSTVVSN
Physico‐chemical
properties
protein length:446 AA
molecular weight: 47442,58660 Da
isoelectric point:8,93630
aromaticity:0,07848
hydropathy:-0,13296

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Yersinia phage vB_YenM_TG1
[NCBI] 		1589265 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Yersinia enterocolitica
[NCBI] 		630 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Yersinia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AJD81969.1 [NCBI]
Genbank nucleotide accession
KP202158.1 [NCBI]
CDS location
range 85041 -> 86381
strand +
CDS
ATGTCACAAAATAATATAAATCATATTAGTGATTCATCAAGTTATGTGACATTTAACCCTACAGGTACCCAGTGGCCTGTAACTGTTGTTAATGTCCAACAAGCCCTTGCCAATATTGGTTCTTGGGCTACTATATCTGGTGGATTGCCTATTGCTTCAGAAACTGTTGCTGGTATTTCTCGTATTGCTACCAATGCCGAAATATTAGCCGGGACTGATGATACAACAATTGTAACTCCTAAGAAATTAAATGAGCGTTTACAATACCCACAAGCAACTGAAATTCAATTTGGCATTGTAAAATTATCTACAATAGCAGAAACTAATGCTTTTGCTAATGATAGAAATGTAATTACTCCATATAAATTAGGAAATGTTTTTAATACAATAACTGCAAATACCACTAGATTTGGCACTGTAAAATTAACATCGTCAGTTCAAGCACAGGCTGGCACTGATAATACAACAGCCACCACGCCTGCTCGCGTATTAGAGATGATTAATAAATTCGCTATTGTTCCAGGTGATTATGCCCCGGCAACTGAAACATCTATTGGTTTAGTTTATTTGGCTAATACAGCTCAAGTTGCGGCAGGAGATATTAGAGCTGGGTATGCTGTTTCTCCATATTCGTTTAAAAATACTCAAGCAAGCACAGTTCAAGTTGGTACTACTCGTTTAGCAACTTTAGCCGAATTAAAAAATGGTGAGTCTAATCTTTCAGTGTCTCCTTCTATTTTACAACAAATGGATGCTAATAATTTGACTAAAGGCCTTGTTAAGTTATCTGTCAATCCATCAACGGCAGTCGGAACAGCCTTAGCAGCTAATGCCAATGTTGTCTGGAAAACGCAAAAAATTAATGGTATAGCTTTTACAGGTGATATAAATGTTACGGCTGAGCAAGTGAATGCTTATTCTAAACCAGAAGCAGATGGAAGATTTAAACCTATTAATGCTCCTAATGGCACAAAAGTTGTTATTAATGGTGCAGATAACATTGGTTGGGCTAATATGGAAGTTGCTCGTTGCCCTGGCGATACAGGAACTTATACCGCTGTAATTAATTTGCATGTCAAATTTACTCAGAATGGCGATGGGCAACAAAATAGATATTTGAACTTTAACGTTTTACATAACGGTGGGATAAACCAGCAGCGATATGTGAACCTATTCAATGCCAAGGGTGGTTCTAAAGGTCATTATTGGGGCTTCGAAGGATTCACAACAACTGTAATTAGAATTGGTCCATTGGCCCCTAATTCAGTTATCGTTTTACAACCTACAGCTAACCATGCATTCCAATATTGGGGTTACTCTTCTACTGTTGTAAGTAATTAA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
7669c541d70319cdf7359776c01394f955e572571411c0873db76cd1e8e4ef03
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6874
Evidence 0,6874
Download PDB

Literature

Title Authors Date PMID Source
Complete genome sequence of vB_YenM_TG1, a broad host range bacteriophage which infects Yersinia enterocolitica Leon-Velarde,C.G., Kropinski,A.M., Chen,S., Griffiths,M.W. and Odumeru,J.A. 2014-10-28 — GenBank