Protein

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Genbank accession
ARQ96716.1 [GenBank]
Protein name
tail spike protein
RBP type
TSP
Evidence Phold
Probability 1,00
Protein sequence
MSITYASISSLLASPFQRLTSGMWNTASLLLIQLYETGGNAVTSILKNGNLTIPGTINASSGFFYNEIYVAGQPVLTELDPIYIAGFIATANQQINAILYSNEQLYYSIVKLPQEIYEKIIVAVPTATLILSKDTQALYETIYSVVNYLISNIEQSRTIIKEDLQNFYISFYETINSIAKKLGISLQSAIYFIANSIAYTLTYVYLATVGLANTINKLGLYLSPPTIEGLQLDVSTTPSPLYTGPSIETVRIILQNLSNYIVYIGNNLYNNFPILQNDSIEIHVNNPSNVYAWATGKAKVYALFEVI
Physico‐chemical
properties
protein length:307 AA
molecular weight: 33978,51780 Da
isoelectric point:4,80724
aromaticity:0,11726
hydropathy:0,29837

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ARQ96716.1
1 307
Domain Start End Length (AA) Confidence
N-terminal 1 302 302 0,9983
Central domain 303 302 1 0,0153
C-terminal 303 307 4 0,9168
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-302
Central
303-302
C-terminal
303-307

Taxonomy

  Name Taxonomy ID Lineage
Phage Sulfolobus islandicus rod-shaped virus 11
[NCBI] 		1983546 No lineage information
Host Sulfolobus islandicus
[NCBI] 		43080 cellular organisms > Archaea > Thermoproteati > Thermoproteota > Thermoprotei > Sulfolobales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ARQ96716.1 [NCBI]
Genbank nucleotide accession
KY744234.1 [NCBI]
CDS location
range 23032 -> 23955
strand -
CDS
ATGAGCATTACATATGCCTCAATTTCGAGTTTGTTGGCTTCGCCTTTCCAGAGATTGACATCTGGAATGTGGAATACCGCATCTTTGCTTTTAATTCAATTGTATGAGACAGGCGGAAATGCAGTAACTTCAATTTTGAAAAATGGAAATTTAACAATTCCAGGAACAATAAATGCTAGTTCCGGATTTTTTTATAATGAAATTTATGTAGCTGGACAACCAGTACTTACAGAGTTAGATCCGATATATATCGCTGGATTTATAGCTACTGCAAATCAACAAATAAATGCAATTTTATACTCTAATGAACAATTATACTATTCAATTGTTAAACTTCCTCAGGAAATTTACGAGAAAATTATAGTTGCTGTTCCAACTGCTACTTTAATTTTAAGCAAAGATACTCAGGCTTTATACGAAACGATATATAGTGTCGTAAATTATTTAATTTCAAATATTGAACAATCTAGGACTATAATAAAAGAAGATTTACAGAATTTCTATATTTCATTTTACGAAACTATAAACTCAATAGCTAAAAAATTAGGAATTTCGTTACAAAGTGCAATATATTTTATTGCGAATTCTATAGCTTATACACTTACATATGTATATTTAGCAACTGTCGGTTTGGCAAATACAATTAATAAACTTGGTTTGTACTTAAGTCCGCCAACTATAGAAGGCCTTCAACTTGATGTTTCTACTACTCCAAGTCCTTTATATACAGGCCCATCCATAGAAACTGTAAGAATAATTCTCCAAAATCTCAGTAATTATATCGTTTATATTGGCAATAATTTATATAATAACTTTCCAATTCTCCAAAATGATTCAATAGAAATTCATGTAAATAATCCTAGTAATGTTTATGCTTGGGCAACTGGAAAAGCTAAAGTTTATGCTCTATTTGAGGTCATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
90a936d9e0315bc2a0b84581acead3ac35ef27048467b6f39dafe74446cae7d7
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,5534
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Differentiation and structure in Sulfolobus islandicus rod-shaped virus populations Bautista,M.A., Black,J.A., Youngblut,N.D. and Whitaker,R.J. 2017 — GenBank