Protein

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Genbank accession
XPN52075.1 [GenBank]
Protein name
long tail fiber protein distal subunit
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,83
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MATLKQIQFKRSKTAGARPAASVLAEGELAINLKDRVLFTKDDQGNIIDLGFAKGGSIDGNVIHTGNYNQTGDYTLNGVFTQTGNFNLTGIARVTRDIIAAGQIMTEGGELITKSSGTSHVRFFDNNSRERGIIYAPANDGLTTQVLNIRVQDYAAGSESIYAFSGSGLFISPEVSAHKSISSPQILTDKVITNGKKAGDYDIYSLANNTPLSESTTAINHLRVMRNAVGSGIFHEVKDNDGITWYTGDGLDTYLWSFTWSGGLKAGHSISIGTPGGPKGYSELGTASIALGDNDTGLKWHQDGYYFSVNNGTKTFLFSPNETTSLRKFVAGYSTNGADLTTPPTENYALATVVTYHDNNAFGDGQTLLGYYQGGNYHHYFRGKGTTNINTHGGLLVTPGDINVIGGSVNIDGINNSSTLLFRGNTTGASSVDNMTISVWGNTFTNPSVGNRKNVMEISDATSWMSYIQRLTTGEVEMNVNGSFESSGVTAGHRGVHTPGEISSGAVNALRIWNADYGAIFRRSEGSLHIIPTAYGEGKHGDIGPLRPFSMALDTGKVTIPDLQSSYNTFAANGYIKFAGHGAGAGGYDIQYVQAAPIFQEIDDDAVSKYYPIVKQKFLNGKAVWSLGTEINSGTFVIHHLKEDGSQGHTSRFNQDGTVNFPDNVQVGGGEATIARNGNIWSDIWRTFTSAGDVTNIRDAIATRVAKEGDTMTGRLTLNANSDAIVINSAATESGYLKGQKAGVDNWYVGNGGADNAISFYSFQNRSGIHVNNGGDIALNPEGSATFNFNRDRIYINGSVWTAHQAGDWGNQWRQEAPIFVDFGSVGNDSYYPIIKGKSVITNEGYVSGVDFGMRRIPNNWAQGIIRVGNQENGSDPQAIFEFHHNGNMYVPDMVKAGVRISAGGGNPAWTGPCLVIGDNDTGLVHGGDGRINMVADGVHIASWGSQRLAHEGLWDSYGSFWTEVGKAIVSHGHLVQQGDAYSTFVRDVYVRSDIRVKKDLVKFENASEKLSKINGYTYMQKRGTDEEGNQKWEPNAGLIAQEVQAILPELVEGDPDGEALLRLNYNGVIGLNTAAINEHTAEIAELKSEIEELKALVKSLLK
Physico‐chemical
properties
protein length:1103 AA
molecular weight: 118711,93180 Da
isoelectric point:5,61316
aromaticity:0,09429
hydropathy:-0,34034

Domains

Domains [InterPro]
DC_0538
STR
1–689
DC_0538 G3DSA:6.20.80.10 IPR030392
DC_0339
STR
616–1031
DC_0339 Coil
IPR048388
ATT
725–775
IPR048388 IPR030392
DC_1381
RBD
1005–1103
DC_1381
XPN52075.1
1 1103
Architecture
STR
ATT
STR
RBD
STR 1-724 | ATT 725-775 | STR 776-1031 | RBD 1032-1103
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XPN52075.1
1 1103
Domain Start End Length (AA) Confidence
N-terminal 1 39 39 0,9164
Central domain 40 238 200 0,2277
C-terminal 239 1103 864 0,7923
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-39
Central
40-238
C-terminal
239-1103

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage Pu-Krd-SF6
[NCBI] 		3389967 Viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XPN52075.1 [NCBI]
Genbank nucleotide accession
PQ759886 [NCBI]
CDS location
range 9756 -> 13067
strand -
CDS
ATGGCTACTTTAAAACAAATACAATTTAAAAGAAGCAAAACTGCAGGAGCACGTCCTGCCGCTTCAGTATTAGCCGAAGGCGAATTGGCTATAAACTTAAAAGACCGTGTACTTTTTACTAAAGATGACCAAGGAAATATTATTGATCTGGGTTTTGCTAAAGGCGGTAGTATTGACGGGAATGTTATTCATACAGGCAATTATAACCAAACTGGCGATTATACTTTAAATGGCGTCTTCACTCAGACTGGTAATTTTAATTTAACTGGTATTGCTCGAGTAACTCGTGATATTATTGCCGCTGGGCAGATTATGACTGAAGGCGGTGAACTTATTACAAAAAGTTCAGGTACATCACATGTTCGTTTTTTCGATAATAATAGTCGCGAACGTGGAATCATTTATGCCCCGGCTAATGATGGTTTAACTACACAAGTACTTAATATCAGGGTTCAAGACTACGCTGCTGGTAGCGAAAGCATTTATGCATTTTCAGGCAGTGGCCTATTTATTTCACCTGAAGTATCAGCACATAAATCTATTTCGTCTCCACAAATTCTGACCGACAAAGTTATTACAAACGGGAAGAAGGCAGGAGATTATGATATCTATTCATTAGCAAATAACACCCCATTATCTGAAAGCACTACTGCTATTAATCATCTTCGTGTCATGCGTAATGCAGTCGGTTCTGGCATTTTCCATGAAGTTAAAGATAATGATGGAATAACTTGGTATACTGGAGATGGCTTAGACACTTATCTTTGGTCGTTTACATGGTCAGGTGGATTGAAAGCGGGACATTCTATTTCTATAGGTACCCCAGGCGGTCCAAAAGGATATTCTGAATTAGGAACGGCCTCAATTGCTCTTGGTGATAATGACACTGGGTTAAAATGGCATCAGGACGGATATTATTTTAGCGTTAATAATGGAACAAAAACGTTTTTATTTAGTCCCAACGAAACAACTAGCCTAAGAAAATTTGTAGCTGGATATTCTACCAACGGAGCCGATTTAACTACTCCTCCAACTGAAAACTATGCTCTTGCTACTGTAGTGACATACCACGATAATAACGCGTTTGGAGACGGTCAGACTCTTTTAGGATATTACCAAGGCGGTAATTATCATCACTATTTCCGCGGTAAAGGTACTACAAACATTAATACTCACGGTGGTTTATTAGTTACTCCAGGTGATATTAATGTTATCGGTGGTTCGGTTAATATTGATGGTATAAATAATTCTTCTACCCTGCTATTTAGAGGTAACACGACCGGAGCTAGTTCAGTTGATAATATGACAATTTCTGTATGGGGTAATACGTTTACTAATCCTAGTGTAGGTAATCGTAAAAACGTCATGGAAATTTCTGATGCAACTAGTTGGATGAGCTATATTCAAAGACTTACAACAGGTGAAGTAGAAATGAACGTTAACGGTTCATTTGAATCATCTGGTGTTACTGCTGGACATAGAGGAGTTCACACACCAGGCGAAATTTCATCTGGGGCGGTGAATGCACTTCGTATTTGGAATGCAGATTATGGAGCCATTTTTAGACGTTCAGAAGGAAGTCTTCATATTATTCCAACTGCTTATGGTGAAGGTAAACACGGCGATATCGGTCCACTTCGCCCGTTTAGTATGGCTTTAGATACCGGTAAAGTTACTATTCCAGATTTACAATCAAGTTACAATACGTTCGCTGCTAACGGTTATATTAAATTTGCTGGTCATGGCGCAGGCGCTGGTGGTTATGATATTCAATATGTTCAAGCGGCTCCTATTTTCCAGGAAATCGATGATGATGCTGTAAGTAAATATTATCCTATTGTTAAGCAGAAGTTTTTAAACGGTAAAGCAGTTTGGTCTTTAGGTACTGAAATTAATTCGGGTACATTCGTTATTCATCATCTGAAAGAAGATGGATCACAAGGCCATACGTCTCGTTTTAATCAAGACGGTACTGTTAACTTCCCTGATAACGTTCAGGTCGGTGGCGGTGAAGCTACTATTGCTCGCAATGGTAACATCTGGTCTGACATCTGGAGAACATTTACTTCAGCAGGCGACGTAACTAATATCCGTGACGCTATTGCGACTCGTGTTGCTAAAGAAGGTGATACGATGACAGGCCGCTTAACTCTTAATGCAAACTCGGATGCTATTGTTATTAACAGTGCCGCAACCGAATCTGGCTATTTGAAAGGACAAAAAGCAGGCGTTGATAACTGGTATGTAGGTAATGGTGGGGCTGATAATGCCATATCGTTTTATAGTTTCCAAAATAGATCAGGCATACATGTTAATAATGGTGGTGATATTGCTTTAAACCCGGAAGGGTCTGCCACTTTTAATTTTAATAGGGATCGAATTTATATAAATGGGTCAGTCTGGACCGCACACCAGGCTGGTGACTGGGGTAACCAATGGCGTCAAGAAGCTCCTATATTTGTGGATTTTGGTAGTGTCGGTAATGATAGTTATTATCCAATTATCAAAGGAAAATCTGTTATTACGAATGAAGGATACGTATCTGGCGTTGATTTTGGTATGCGTCGCATTCCTAATAACTGGGCACAAGGTATTATTCGTGTAGGTAATCAGGAAAACGGTTCCGACCCACAAGCTATCTTCGAATTCCACCATAATGGAAACATGTACGTTCCTGACATGGTTAAAGCTGGAGTAAGAATATCAGCTGGCGGTGGTAACCCGGCGTGGACTGGACCATGTCTTGTTATTGGTGATAATGATACCGGATTAGTTCATGGCGGTGATGGGCGAATCAATATGGTTGCCGATGGTGTTCATATTGCGTCATGGGGGTCTCAACGTCTGGCACATGAGGGGTTATGGGATTCATACGGGTCGTTTTGGACAGAAGTCGGTAAAGCTATTGTTTCTCATGGTCATCTAGTCCAACAGGGTGATGCCTATTCTACCTTTGTTCGTGATGTTTATGTCCGTTCTGATATTCGTGTTAAAAAAGACCTTGTTAAATTTGAAAATGCTTCTGAGAAGCTTTCTAAAATTAACGGTTACACTTATATGCAGAAACGTGGAACGGACGAAGAAGGCAATCAGAAATGGGAACCTAACGCCGGTTTAATTGCTCAAGAAGTTCAAGCTATTTTACCAGAGTTAGTTGAAGGCGACCCGGATGGTGAAGCTTTACTTCGTTTGAACTATAACGGTGTAATTGGTTTAAATACAGCTGCAATCAATGAGCATACTGCAGAAATTGCTGAACTTAAATCAGAAATTGAAGAACTTAAAGCATTAGTTAAATCATTGTTAAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
09ef8971fb39f6f56cc1e249ce1715320392e380927591530050723ea3c490a1
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2888
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50