Protein

View in Explore
Genbank accession
QIG66003.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,57
Protein sequence
MTKAFQIGKVITGLSTGQYNNSLSGFRNKIINPDFEITQRGGSFPFAINTGAGSYTLDRWRYAGSNTFGNAVTISQLAMPSGYNGIPGYVRYYARLNRTTTGTGLTALQQRIEGVRTLAGKRSTLTFWVRGTNDKIIKTQIQQVFGTGTPTPSPVVEVVSAGISATLTSTFTRYDVVFDMPSIDSASVYGADDRVEVSFILYENQGNAQFDIAHVSLVEGDARNDPDPCAPRDLGTELDLCKRYYQRIDVDGSVWLLGQTSIATSTRAYVLLDFEKEFRVRPSVAYIGGSASYFDGVSWQYTTTQVVAIQGPMRVQFSVTVPAIQPPGNAGATCWLINFNKIGGGVGYIEGHAEL
Physico‐chemical
properties
protein length:355 AA
molecular weight: 38628,95130 Da
isoelectric point:7,64157
aromaticity:0,10986
hydropathy:-0,13915

Domains

Domains [InterPro]
DC_0568
STR
4–348
DC_0568
IPR008979
STR
30–219
IPR008979
G3DSA:2.60.120.260
STR
42–217
G3DSA:2.60.120.260
QIG66003.1
1 355
Architecture
STR
STR 4-348 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Ochrobactrum phage vB_OspM_OC
[NCBI] 		2712956 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Ochrobactrum sp. POC9
[NCBI] 		2203419 Pseudomonadota > Alphaproteobacteria > Hyphomicrobiales > Brucellaceae > Ochrobactrum >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIG66003.1 [NCBI]
Genbank nucleotide accession
MT028491.1 [NCBI]
CDS location
range 196699 -> 197766
strand +
CDS
ATGACTAAAGCATTTCAGATCGGGAAAGTCATTACAGGACTTTCCACCGGTCAATATAATAATAGTTTGAGTGGTTTCAGAAACAAAATCATCAATCCAGATTTTGAAATTACACAAAGAGGGGGATCGTTCCCATTCGCGATCAACACAGGTGCTGGTTCTTATACTTTGGATCGCTGGCGATATGCTGGTTCAAATACATTTGGAAACGCTGTGACTATAAGTCAACTGGCAATGCCATCTGGATATAATGGAATTCCCGGTTATGTTAGATATTATGCAAGGCTTAATAGAACAACAACTGGTACAGGTCTTACAGCACTTCAACAAAGAATCGAAGGTGTAAGAACATTGGCTGGAAAGCGTTCTACATTAACATTTTGGGTTCGTGGTACAAATGATAAGATTATTAAGACGCAAATACAACAAGTTTTCGGAACTGGAACTCCTACACCATCACCAGTTGTTGAAGTTGTTTCAGCCGGAATTAGCGCAACATTGACTTCAACATTTACACGATATGATGTTGTATTTGATATGCCTTCCATTGATTCGGCTTCTGTTTATGGTGCTGATGATCGTGTAGAAGTATCATTTATTCTTTATGAGAATCAGGGAAATGCCCAATTTGATATCGCTCACGTTTCATTGGTTGAAGGTGATGCTAGGAATGATCCTGATCCTTGTGCACCACGCGATTTAGGAACCGAATTAGACCTTTGTAAGAGATACTATCAAAGAATTGATGTAGATGGTTCTGTTTGGCTATTAGGTCAAACATCTATTGCAACGTCTACTAGAGCATATGTTCTATTGGATTTTGAAAAAGAATTCAGAGTACGACCAAGTGTTGCTTATATAGGTGGAAGTGCATCTTATTTTGATGGTGTTAGTTGGCAATATACAACAACACAAGTAGTGGCAATACAAGGCCCTATGCGAGTCCAGTTTTCAGTAACCGTTCCAGCTATTCAACCACCGGGTAATGCTGGTGCTACATGTTGGCTAATTAATTTCAATAAAATTGGTGGCGGGGTTGGATATATCGAAGGCCATGCCGAATTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
296be662bf6c1fdaa74fb55ef51924061509bcf5eebd0a0cdccf5208a44d6ffe
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8120
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Identification and Characterization of First Virulent Phages, Including a Novel Jumbo Virus, Infecting Ochrobactrum spp. Decewicz,P., Golec,P., Szymczak,M., Radlinska,M. and Dziewit,L. 2020-03-18 — GenBank