Protein

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Genbank accession
WYD62134.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MSLNDLQIAKKHQIFEAEVITGKQGGVAGGADIDYATNPVTGQTQKTLPAVLRGAGFSPASFNFTTGGTLGVNDADKAVLWSKEDGGDGNYYAWRGSLPKVIPAASTPLAAGGISDSAWDAFGDITFRAEADKKFKYSVKLSDFTTLQQLADAAVDSVLIDRDYTFSNNETVNFSGKTLTIDCKAKFIGDGNLVFTQLGKGSIVIAPFMESATTPWVIKPWTDDNQWITDPAAIVATLKQSKTDGYQPTVNDYAKFPGIESLLPPEAKGQSISSTLEIRECTGVEVHRASGLMACFLFRGCHFCKMVDADNPSGGKDGVITFENLSGDWGKGNYVIGGRTSYGSVSSAQFLRNNGGFARDGGVIGFTSYRAGESGVKTWQGTVGSTTSRNYNLQFRDSAVLYPVWDGFDLGADTDMNPEDDRPGDFPISQYPVHMLPLNHLIDNLLVRGSLGVGFGMDGKGLYVSNITVEDCAGSGAYILAHETVFTNIAIIDTNTKNFPANQIYISGACRVNGLRLVGIRSTSGQGLTIDAPNSTVSGITGFVDPSRINVANLMEEGLGNSRINSFNNDSAALRLRIHKLSKTLDSGSVYSHINGGPGSGSAWTEITAIAGSLPDAVSLKINRGDYRAVEIPVAVTVLPDNAVRDNGAISLYLEGDSLKALVKRADGSYTRLTLA
Physico‐chemical
properties
protein length:676 AA
molecular weight: 71911,67690 Da
isoelectric point:5,22216
aromaticity:0,08728
hydropathy:-0,15133

Domains

Domains [InterPro]
G3DSA:2.10.10.80
ATT
57–127
G3DSA:2.10.10.80 IPR011050
IPR040775
RBD
63–123
IPR040775 IPR012332
IPR015331
RBD
130–676
IPR015331
WYD62134.1
1 676
Architecture
ATT
STR
ATT 57-127 | STR 128-676
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WYD62134.1
1 676
Domain Start End Length (AA) Confidence
N-terminal 1 146 146 0,9923
Central domain 147 592 447 0,9872
C-terminal 593 676 83 0,8356
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-146
Central
147-592
C-terminal
593-676

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage vB_SenS_4FS1
[NCBI] 		3135707 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella sp.
[NCBI] 		599 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WYD62134.1 [NCBI]
Genbank nucleotide accession
PP537413.1 [NCBI]
CDS location
range 26022 -> 28052
strand -
CDS
ATGTCACTTAATGATTTACAGATAGCTAAAAAACACCAGATTTTCGAAGCCGAGGTTATCACCGGTAAACAAGGCGGTGTAGCCGGCGGTGCAGATATCGACTACGCCACTAACCCGGTAACCGGGCAGACGCAGAAGACGCTTCCCGCAGTCTTACGTGGTGCTGGTTTCTCCCCGGCATCTTTTAATTTTACGACCGGGGGTACTCTCGGCGTAAACGACGCAGATAAAGCTGTTCTTTGGTCGAAAGAAGATGGTGGAGACGGTAACTACTACGCATGGCGTGGCTCCCTGCCGAAAGTTATCCCTGCGGCGTCGACACCTCTTGCGGCAGGCGGCATTTCGGATTCCGCTTGGGACGCGTTCGGAGATATCACCTTCCGTGCGGAAGCGGATAAGAAATTTAAATACTCCGTTAAGCTGTCCGACTTTACTACGTTACAACAATTGGCGGATGCCGCTGTTGATAGTGTTCTTATCGACCGCGATTACACTTTCAGTAATAACGAGACCGTTAACTTCAGCGGGAAGACCCTGACCATCGACTGTAAAGCGAAGTTTATCGGCGACGGAAACCTGGTATTTACGCAATTAGGTAAAGGTTCCATTGTAATAGCCCCCTTTATGGAGAGTGCTACAACGCCGTGGGTGATTAAACCGTGGACCGACGATAATCAGTGGATAACCGACCCCGCGGCAATCGTGGCCACACTTAAACAGTCTAAAACAGATGGATACCAGCCGACGGTAAACGATTACGCCAAGTTTCCTGGTATAGAATCCCTTCTCCCTCCGGAAGCTAAAGGGCAAAGCATATCTTCTACCCTGGAAATTCGGGAATGTACAGGCGTCGAGGTTCACCGGGCGAGTGGTCTTATGGCGTGTTTCCTGTTCCGCGGATGCCATTTCTGTAAGATGGTAGACGCTGACAACCCGAGCGGCGGAAAAGATGGCGTAATTACCTTTGAAAACCTGAGCGGCGATTGGGGCAAGGGTAACTATGTTATTGGCGGGCGCACAAGTTACGGTTCGGTAAGTAGCGCTCAATTCTTACGAAACAATGGCGGTTTCGCGCGCGATGGCGGGGTCATCGGGTTTACTTCGTATCGTGCGGGGGAAAGTGGTGTTAAGACGTGGCAAGGTACGGTAGGTTCTACGACCTCTCGTAACTACAACCTGCAATTCCGGGATTCAGCAGTGCTATACCCTGTATGGGACGGCTTCGATTTAGGCGCAGATACTGACATGAACCCCGAAGATGACCGCCCAGGGGATTTCCCCATTTCTCAGTACCCGGTACATATGCTCCCATTAAACCATTTGATCGACAATCTACTGGTTAGGGGTTCTTTGGGCGTAGGTTTCGGCATGGATGGGAAAGGTCTGTATGTCTCTAACATAACCGTCGAGGATTGCGCTGGTTCTGGGGCTTATATTCTTGCCCACGAAACAGTATTCACTAATATCGCAATAATCGACACCAATACTAAAAACTTCCCCGCGAACCAGATATATATCTCAGGGGCCTGCCGTGTAAACGGCCTTCGTTTGGTCGGCATACGCTCCACTAGTGGACAGGGGTTGACGATAGACGCGCCTAACTCCACGGTAAGTGGTATAACCGGCTTCGTAGACCCCTCAAGGATTAACGTAGCCAATTTGATGGAGGAAGGTCTTGGTAACTCTCGCATAAACAGTTTCAATAATGATTCTGCGGCGCTTCGGTTACGGATACATAAACTGTCAAAAACTCTTGATAGCGGTTCTGTGTACTCCCACATTAACGGCGGGCCAGGTTCTGGTTCAGCATGGACCGAAATTACCGCTATTGCGGGGTCCTTGCCTGATGCCGTGTCATTAAAAATAAACAGGGGCGATTATCGTGCTGTTGAGATACCGGTAGCGGTGACCGTCCTACCAGACAACGCTGTCAGGGATAACGGGGCTATATCACTGTATCTGGAAGGCGATAGCCTTAAGGCGTTAGTTAAGCGGGCCGATGGAAGCTATACAAGATTAACTTTGGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
99079adcebf5abd8fb7910bd9e4ffd6cb8b2430b30fd656f45c82fd7a6b52836
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6883
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50