Protein

View in Explore
Genbank accession
XCP73867.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,80
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MAGESAFEIFVNGELPKRISTEDDPLAVVAGKIPVSTGAGLATTFKDPTEIEGLKGDDGADGKSAFQLAVDAGYQGTEAEWLESLKGEDGAKGDTGLQGDPGEPGPVTNIKSTVTKDDFDTNIAPIDTWEFGDAWFVRGATDTVLMVWSAPESGSPDKGQWINSGDMRGPEGTGLVIRGQWPDNQELPPLAAKGDTYGWKNALYTFMLKAGEEDIFPDNYAYIQIVPQGPQGPKGDTGDKGDKGDKGLKGDTGNPGKDATPFTIKADLASVGDLPLAGDSKPEEAYSVMVEGVRHLFVFSVDENKWMDLGTWQGPKGDKGEDGVLGGDGPKGDKGDKGDPGEPGANGVDGAPGENLEILGTYPTMTDLLAAGSTLVIKKAYAVRDVNTLYYVSKTPVASEGDLINLGQFKGEKGDKGDKGDKGDTGLKGDKGDTGDGGKNLVISGVLADLAAIQAIPDPQEQEAWVAADNRHLYMFIDGVWVDLGTHTGAKGDKGDKGDKGDAGSKGDTGDAGPKGDPGENFEIIAIVNTVEEVPPASADNKGKAVVVKGGDVYVNVSGTQFVSAGPIGQKGDQGERGQSMRIVGEVGDVSQLPELVAGETDPADGEAYIVSEIQGDDTVKVIYVANRSTNTYDGPFNIQGPKGDDGPQGIKGDQGEIGQGIKIMGDYPTEAALKTAHPTNTVGNAYSVGPEGSKELYVWAVDGADDTEKYLNLGSFTVGAKGEKGDKGDQGIVGPRGIQGAKGDKGSRWVILPQGVDTPNNTIGVQDDWCLDKSGKVWYRDAQGWKEFIQLLDVPVAEVETVDQNKKMVRYQMGWAPLLVDEVEAAAEGEQYVRKGKADGTTEWAPFELGIAVVEDVAAATGVFSRSKGSWVPAAPNPTGNDENKFFVLKGTKSWVETEIFKDAASDGKAYARKDGAWAAVVPETANDDKLYARKTTVAGVSSWVEVPAAIIAADAPDAKNYTRSKGEWKELVTIPEPAVDATKVFGRQTTAAGTSAWVEITKGFDTYSLKTSSVNAAFTLTPANQQCYNVDASAQRAITLADGPTGRMVTAVLVLAGAVMPTFTGKFKWNDSTAPELAATKTVITLLWDGSEWIGAKGAGY
Physico‐chemical
properties
protein length:1103 AA
molecular weight: 115891,05480 Da
isoelectric point:4,49496
aromaticity:0,07616
hydropathy:-0,44678

Domains

Domains [InterPro]
DC_0272
ATT
1–52
DC_0272 IPR050149 G3DSA:6.20.230.10
DC_1340
STR
207–337
DC_1340 DC_1065 DC_1065 DC_1339
DC_1340
STR
322–430
DC_1340 DC_1340
XCP73867.1
1 1103
Architecture
ATT
STR
STR
ATT
STR
ATT 1-52 | STR 207-661 | STR 666-900 | ATT 901-923 | STR 924-1101 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage HPP-Temi
[NCBI] 		3234043 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XCP73867.1 [NCBI]
Genbank nucleotide accession
PP968062.1 [NCBI]
CDS location
range 152560 -> 155871
strand -
CDS
ATGGCTGGTGAATCCGCATTTGAAATTTTCGTTAACGGTGAACTACCTAAGCGTATTTCGACCGAGGACGATCCTCTTGCGGTAGTTGCAGGCAAGATCCCGGTTTCGACCGGGGCTGGCCTGGCTACCACTTTTAAAGATCCGACAGAAATTGAAGGTCTGAAAGGTGACGACGGTGCGGATGGTAAATCCGCATTCCAACTGGCAGTTGATGCCGGTTATCAAGGTACAGAAGCCGAGTGGCTGGAATCGCTGAAAGGCGAAGACGGCGCTAAAGGTGATACTGGTCTGCAAGGTGATCCGGGTGAACCGGGCCCTGTTACCAATATCAAAAGTACCGTAACTAAAGACGACTTCGATACCAACATTGCTCCCATCGATACTTGGGAATTCGGTGATGCTTGGTTCGTCCGTGGCGCTACTGACACCGTCCTGATGGTTTGGTCTGCTCCTGAATCTGGTTCGCCGGATAAAGGTCAGTGGATTAACTCCGGTGATATGCGTGGACCGGAAGGTACTGGTCTGGTTATCCGTGGTCAATGGCCCGACAACCAAGAACTGCCTCCGCTGGCCGCCAAAGGCGATACCTATGGTTGGAAGAACGCTCTTTACACCTTCATGCTGAAAGCTGGTGAAGAGGATATCTTCCCGGACAACTACGCATACATTCAGATCGTACCGCAGGGTCCCCAGGGTCCTAAAGGTGATACTGGTGACAAGGGCGATAAAGGCGATAAGGGTCTGAAAGGCGATACCGGTAACCCCGGTAAAGATGCCACACCGTTCACCATCAAAGCTGACCTGGCTTCCGTAGGTGATCTTCCCCTGGCTGGTGATTCCAAACCCGAAGAAGCCTACTCCGTAATGGTAGAAGGTGTTCGTCATCTGTTCGTGTTCTCCGTAGACGAGAACAAGTGGATGGACCTGGGTACCTGGCAAGGTCCGAAGGGTGATAAGGGTGAAGACGGCGTCCTTGGTGGCGACGGTCCTAAAGGTGACAAGGGCGATAAAGGTGATCCGGGTGAGCCTGGTGCCAACGGTGTCGATGGTGCTCCTGGTGAAAACCTGGAAATCCTCGGTACCTATCCGACCATGACTGACCTGCTGGCTGCTGGCTCTACTCTTGTTATCAAGAAAGCCTACGCTGTCCGTGACGTTAACACTCTGTACTACGTTTCCAAAACTCCCGTTGCTTCCGAAGGCGACCTGATCAACCTTGGCCAGTTCAAGGGTGAGAAAGGCGACAAAGGGGATAAAGGTGACAAGGGTGATACTGGTCTGAAAGGGGATAAAGGTGACACCGGTGACGGTGGTAAGAACCTTGTAATCTCCGGCGTACTGGCTGACCTGGCTGCAATCCAAGCAATTCCGGATCCGCAAGAACAGGAAGCTTGGGTAGCTGCTGATAACCGCCACCTCTACATGTTCATCGATGGTGTCTGGGTTGACCTTGGTACTCACACTGGTGCGAAAGGCGACAAGGGTGATAAAGGGGACAAAGGTGATGCCGGCTCGAAAGGTGATACTGGCGACGCAGGTCCTAAGGGTGATCCAGGTGAGAACTTCGAGATTATCGCCATCGTTAACACCGTAGAAGAAGTACCTCCGGCTTCGGCTGACAACAAAGGTAAAGCCGTTGTTGTTAAAGGTGGTGATGTCTACGTAAACGTTAGCGGTACCCAGTTCGTTTCCGCAGGCCCTATCGGTCAGAAAGGTGACCAAGGTGAGCGTGGTCAATCCATGCGTATCGTTGGTGAAGTTGGTGATGTATCTCAACTACCTGAACTGGTAGCTGGTGAAACCGATCCTGCTGACGGCGAAGCCTACATCGTTTCCGAGATCCAAGGTGATGACACTGTTAAGGTAATCTACGTAGCTAACCGCTCGACGAATACCTACGACGGTCCGTTCAACATCCAGGGTCCGAAGGGTGATGATGGTCCTCAGGGTATCAAAGGTGACCAAGGCGAAATTGGCCAAGGCATCAAGATCATGGGTGACTACCCGACTGAAGCCGCTCTGAAAACAGCACATCCGACTAACACAGTAGGTAACGCTTACTCTGTAGGTCCGGAAGGTTCGAAAGAACTTTACGTGTGGGCTGTTGATGGTGCCGATGACACTGAGAAGTACCTGAACCTGGGTAGCTTCACTGTTGGTGCTAAAGGTGAGAAAGGCGATAAGGGTGATCAGGGTATCGTTGGTCCTCGTGGTATCCAAGGTGCTAAGGGTGACAAAGGTTCCCGTTGGGTAATTCTGCCGCAAGGCGTAGACACCCCGAACAACACTATCGGTGTACAAGACGACTGGTGCTTGGACAAATCCGGTAAGGTTTGGTATCGCGATGCTCAAGGCTGGAAAGAGTTCATCCAACTGCTGGACGTACCGGTTGCTGAAGTAGAAACCGTCGACCAGAACAAGAAGATGGTCCGTTACCAGATGGGTTGGGCTCCGCTACTCGTAGACGAAGTTGAAGCTGCTGCTGAAGGCGAACAATACGTTCGTAAAGGTAAAGCTGACGGTACTACTGAGTGGGCTCCGTTCGAACTCGGCATTGCTGTAGTTGAAGACGTTGCTGCTGCCACTGGTGTCTTCTCTCGTTCTAAAGGTTCTTGGGTACCCGCTGCCCCGAATCCGACTGGTAACGACGAGAACAAGTTCTTCGTACTGAAAGGTACTAAGTCTTGGGTTGAGACTGAAATCTTCAAAGACGCCGCAAGTGATGGTAAGGCATACGCTCGTAAAGACGGTGCTTGGGCTGCTGTAGTTCCTGAAACCGCTAACGATGACAAACTGTACGCTCGTAAGACTACTGTTGCTGGCGTGTCCAGCTGGGTAGAAGTACCTGCTGCAATCATCGCTGCGGATGCTCCGGATGCCAAGAACTACACTCGTTCCAAAGGCGAGTGGAAAGAACTGGTAACCATTCCGGAACCGGCTGTTGACGCTACTAAGGTCTTCGGTCGTCAGACTACCGCTGCTGGTACTTCTGCTTGGGTAGAAATCACTAAAGGTTTCGACACCTACAGCCTGAAGACTTCTTCGGTAAACGCAGCATTCACCCTGACTCCGGCTAACCAACAGTGCTACAACGTCGATGCTTCTGCTCAACGTGCAATCACTCTGGCCGATGGTCCGACTGGTCGTATGGTCACAGCTGTACTGGTACTGGCAGGTGCTGTAATGCCTACCTTCACCGGTAAGTTCAAGTGGAATGATTCGACTGCTCCTGAACTGGCCGCCACCAAAACTGTCATCACCCTTCTGTGGGATGGTAGTGAATGGATCGGTGCCAAAGGTGCTGGCTACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
08746f07e65fce1c5d07d7cf86c1b11af3088c82e565caf59792e72fa21cca6e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6557
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome of Pseudomonas phage HPP-Temi Olorundare,O.O., Agu,C.G., Kabantiyok,D., Ogundeji,A., Dung,T., Zrelovs,N., Svanberga,K., Jansons,J., Kazaks,A., Morenikeji,R.O. and Pewan,B.S. 2024-10-25 — GenBank