Protein

Genbank accession
AIM40728.1 [GenBank]
Protein name
putative tail spike protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
TF
Evidence Phold
Probability 1,00
Protein sequence
MSLELEVWQAPIVDDEGNIQAGAQITVWDADTNESSTIYDDLDRSPKNNPFTVGSDGLARFYAEPGRYRIQAQSGSDIAVADDVDLSQKAHRLDLESAGIEQALSLRQDLENQGLPQALVLRSDLSSEDADKGGVLVRRNVIAVDSIADLLALPAEARRADLRVDVKGYHAGTDVGGGQFYWDNLSEDDADDGITFEVPGVAFGRWKRLYKKTYSLFDFGCRGDGKIDDSGKGTGIGTDDTDRVQLALNSCKELEGLGGDAVFKITKPLSGGVCKNLSDCTFDYSEGQTGGIESGLLYFEGVQSEEINCDPVFEGGTSILVSDASDFIANQFIFITSNDLWDLDDDMAAMGEMHEVESISGNEIAIKEPILYPMSDNVRVTRLSFNSGIVLSRVRAVGNSLQPQSVLRGFDFRWCSDVIVDNCDLRFFNDRGVSFRRCRNVEVKSSKIGDCLRDGTAYGVVVGQGTYSVKVNHNEIYNCRHGFDVGDVFGVSRYIDVSHNHMYDMRQHALSTHTASDFTNFNHNICTMRRGPLALGAIIRSINSKINDNTFVNPDGANQPAISVVPNPIFSGYTEINRNTIWSGVNGIGIRYINIQPKTDSLVEISGNNIECDGVRGVEARVTFDAEIDVLKIQNNKINGSLDGILIRTDGGESSSSIRKSECTGNSLITDKTGGRAIRVLVQSEGSVGLCRVQSNTASGGFTRGLEQLITQSGGAVLKTFATDNDFSEVVTPSNAIILDSDFSIVRDNINSSMV
Physico‐chemical
properties
protein length:755 AA
molecular weight: 82082,20510 Da
isoelectric point:4,61694
aromaticity:0,07285
hydropathy:-0,26715

Domains

Domains [InterPro]
IPR012334
214–565
IPR012334 IPR006626 IPR006626
IPR011050
232–611
IPR011050
IPR006626
415–437
IPR006626 IPR006626 IPR006626 IPR006626 IPR006626
AIM40728.1
1 755
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Idiomarinaceae phage 1N2-2
[NCBI] 		1536592 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Idiomarinaceae bacterium N2-2
[NCBI] 		1510939 Bacteria > Proteobacteria > Gammaproteobacteria > Alteromonadales > Idiomarinaceae >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AIM40728.1 [NCBI]
Genbank nucleotide accession
KJ847052 [NCBI]
CDS location
range 18178 -> 20445
strand +
CDS
ATGAGTTTAGAACTTGAAGTGTGGCAAGCCCCGATTGTAGATGACGAGGGCAACATTCAGGCAGGCGCGCAGATTACCGTATGGGATGCTGACACTAACGAGTCGTCAACGATTTACGATGACCTTGACCGCTCCCCAAAAAATAACCCGTTTACGGTAGGCTCAGACGGTTTGGCGCGGTTCTACGCTGAGCCTGGGCGGTATCGCATTCAAGCGCAGTCGGGTAGTGACATCGCCGTAGCTGATGATGTGGATTTAAGCCAGAAAGCGCACCGCTTGGACTTGGAAAGTGCGGGAATTGAGCAGGCGCTTTCATTGCGCCAAGACTTGGAAAACCAAGGCCTGCCACAGGCGCTTGTCTTGCGTTCAGACCTTTCAAGTGAAGATGCCGACAAAGGCGGCGTCCTAGTTCGCCGCAACGTCATCGCGGTTGATAGCATCGCTGACCTTTTGGCGCTACCTGCCGAGGCTCGTCGGGCTGATTTGCGGGTTGATGTTAAGGGTTATCACGCTGGAACCGATGTTGGAGGTGGGCAGTTTTATTGGGATAATTTAAGTGAAGATGACGCAGACGATGGGATCACTTTCGAGGTGCCTGGTGTTGCATTTGGGCGCTGGAAGCGACTATATAAAAAAACTTACTCTTTATTTGATTTCGGGTGTCGCGGCGATGGGAAAATAGATGATTCAGGTAAAGGAACAGGCATAGGAACAGATGACACAGACAGGGTTCAATTAGCTCTAAATTCATGTAAAGAGCTTGAGGGTTTAGGCGGTGACGCAGTATTTAAAATAACTAAGCCTCTATCTGGCGGGGTTTGCAAGAATTTATCCGACTGCACATTTGATTATTCAGAGGGGCAGACAGGTGGTATTGAGTCGGGCCTGCTGTACTTTGAGGGCGTCCAATCAGAAGAAATAAACTGCGACCCAGTTTTCGAAGGGGGAACTTCAATATTAGTTTCTGATGCTTCGGACTTTATTGCGAATCAATTTATTTTTATCACCTCCAATGACCTATGGGATTTAGACGATGATATGGCGGCGATGGGGGAAATGCACGAGGTTGAATCTATTTCTGGTAATGAAATAGCGATTAAAGAGCCTATCCTATACCCGATGAGTGACAACGTTCGCGTTACACGATTAAGCTTTAACTCTGGTATTGTGTTGAGTCGTGTTAGAGCGGTTGGTAACTCTTTGCAGCCGCAGTCGGTTTTAAGGGGATTTGACTTTCGATGGTGTTCGGATGTTATAGTGGATAATTGCGACCTAAGATTTTTTAACGACAGAGGCGTGTCGTTTAGGCGGTGCAGAAATGTAGAGGTAAAAAGTAGCAAAATAGGTGACTGCCTGAGAGATGGCACTGCTTACGGCGTTGTTGTCGGTCAGGGCACTTACAGCGTCAAGGTTAATCATAACGAAATATACAACTGCCGTCACGGTTTTGATGTGGGGGATGTTTTTGGCGTTTCTAGATATATTGACGTTAGTCACAATCATATGTATGACATGAGGCAGCACGCCCTTAGCACTCACACAGCATCAGATTTCACAAACTTCAATCACAATATATGCACAATGAGAAGGGGGCCTCTTGCGCTAGGAGCGATCATTCGCAGCATTAATTCGAAGATAAACGACAACACGTTCGTTAATCCCGATGGAGCGAACCAGCCTGCTATATCAGTAGTGCCAAACCCGATTTTTTCAGGGTATACCGAAATAAATAGAAATACCATTTGGAGCGGGGTAAACGGAATTGGAATCAGGTATATTAATATACAACCTAAAACCGACTCTCTTGTCGAGATTAGCGGTAATAATATTGAGTGCGACGGCGTTAGAGGTGTTGAGGCTCGGGTTACTTTCGATGCTGAAATAGATGTATTGAAGATTCAGAATAACAAAATCAACGGAAGCCTGGATGGGATTTTAATCAGGACAGATGGCGGGGAGTCCTCATCAAGCATAAGAAAGTCTGAATGCACAGGCAATTCGCTTATCACTGATAAAACCGGAGGTAGAGCGATAAGAGTTCTTGTTCAATCTGAGGGCTCCGTTGGATTGTGTAGGGTTCAATCAAATACGGCAAGCGGGGGTTTTACGCGGGGTCTTGAGCAGCTAATCACGCAGTCCGGAGGGGCAGTTTTAAAAACTTTTGCAACAGATAATGACTTTAGCGAAGTTGTCACGCCATCAAATGCGATAATACTTGATTCTGACTTTAGCATTGTTAGGGATAACATAAACTCTAGCATGGTGTAA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
a27e9d00f6f2243c09ffc33bbe5008c6e6b324999828067b509811e07e1ab64d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8709
Evidence 0,8709
Download PDB

Literature

Title Authors Date PMID Source
The complete genome of Idiomarinaceae bacterium bacteriophage 1N2-2 isolated from alkaline hypersaline soda lake Lake Nakuru in Kenya Lobo,N., Moulton,K.D., Witbeck,W., Lobo,C.G., Rothschild,L.J., Mwaura,F. and Duboise,S.M. 2013-08 — GenBank