Protein

View in Explore
Genbank accession
ACY75771.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MTTQIQFRRDTDANWATCNPTLASGELGYITDTGLFKIGDGITDWVSLSTFSGGGGGGGLDSSAVQAIIDTNTAGFQTAADVTAAINAHDHDDQGYFFQNSWYYENGRTHVGNPDTVVEADVDVDHDILFSCNTTGDFDNFMPGGLAFPYDRTTGLITMTGFQEAHFVQFRFNVDCCPDTDAGEMIVSLEVQRHNKSPFSIDESLAVMDNGAGVDYQGLATIPIFIGSMEDDGTGNPATVKPRVRLVNTGGDIKPRGFVMYAWT
Physico‐chemical
properties
protein length:264 AA
molecular weight: 28475,97310 Da
isoelectric point:4,19070
aromaticity:0,10606
hydropathy:-0,22765

Domains

Domains [InterPro]
G3DSA:2.10.10.30
ATT
1–44
G3DSA:2.10.10.30
SSF69349
STR
4–257
SSF69349
IPR041352
ATT
5–43
IPR041352
ACY75771.1
1 264
Architecture
ATT
STR
ATT 1-44 | STR 45-257 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Cyanophage PSS2
[NCBI] 		658401 No lineage information
Host Prochlorococcus marinus str. MIT 9313
[NCBI] 		74547 Bacteria > Cyanobacteria > Prochlorales > Prochlorococcaceae > Prochlorococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ACY75771.1 [NCBI]
Genbank nucleotide accession
GU071090.1 [NCBI]
CDS location
range 35536 -> 36330
strand +
CDS
ATGACAACACAAATTCAATTCAGGCGCGACACTGACGCCAATTGGGCGACGTGTAATCCTACACTTGCCTCAGGTGAATTGGGATATATCACAGACACAGGTCTTTTTAAGATCGGTGATGGCATAACGGATTGGGTCTCTTTATCTACATTCTCTGGCGGCGGTGGAGGTGGTGGCTTAGACAGTTCAGCTGTTCAAGCAATCATTGATACAAACACCGCAGGCTTTCAAACTGCTGCCGATGTCACGGCTGCGATTAATGCTCACGATCATGATGACCAGGGGTACTTCTTCCAGAACTCTTGGTATTACGAGAACGGGCGTACACACGTAGGAAATCCCGACACGGTAGTTGAGGCAGATGTTGATGTTGATCACGACATTCTCTTCAGCTGTAACACGACGGGAGACTTCGACAACTTCATGCCTGGCGGTCTGGCTTTCCCTTACGACCGAACCACAGGACTGATCACGATGACCGGCTTCCAAGAAGCCCATTTCGTGCAGTTTCGCTTCAACGTGGACTGCTGCCCTGATACAGATGCTGGCGAGATGATCGTCTCGCTAGAAGTCCAGAGACATAACAAGAGCCCCTTCAGTATCGATGAGTCTCTTGCCGTGATGGATAACGGTGCCGGCGTTGATTACCAGGGCCTGGCAACCATCCCGATCTTTATCGGATCAATGGAGGACGACGGTACAGGGAACCCTGCAACAGTCAAACCGAGAGTTCGCCTAGTTAACACCGGAGGCGATATCAAGCCTCGCGGCTTTGTCATGTACGCCTGGACCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
49660f93f8fb2a8055d9c46d7762ce5aca4913f1ffe9ab7bd7dfd1d0d91037f5
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8464
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Cyanophage PSS2 Henn,M.R., Sullivan,M.S., Osburne,M.S., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Koehrsen,M., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Borenstein,D., Chen,Z., Engels,R., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heilman,E.R., Heiman,D., Hepburn,T., Howarth,C., Jen,D., Larson,L., Lewis,B., Mehta,T., Park,D., Pearson,M., Richards,J., Rizzolo,K., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., Walk,T., White,J., Yu,Q., Coleman,M.L., Huang,K.H., Weigele,P.R., DeFrancesco,A.S., Kern,S.E., Thompson,L.R., Fu,R., Hombeck,B., Chisholm,S.W., Haas,B., Nusbaum,C. and Birren,B. 2011-09-23 — GenBank