Protein

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UniProt accession
A0A8S5SDY8 [UniProt]
Protein name
Leucine-rich repeat protein
RBP type
TSP
Evidence RBPdetect2
Probability 0,64
Protein sequence
MAKNNNLKDFVTGVAGAIREKKGTTELINPQDFENKIRTIQTGIDTSDATATADDIRLDKTAYGADGKMTGTIADYDGTSEPASGKSLFQQRVDGTLKNVTADDLAGITNITANAFYYYDGLMNITIPTSVKSISKSAFGNCGNLSSVEIGTGVMSIGDSAFSSCNKLRDIMIPDNVTTIGDSVFEYCTNMVSVKIGTGITSISDFEFHYCSNLTSVTIPNSVTSIGGSVFRKNSTSTELGGTYTIFATTPPTIQSDTFKDAKINKIIVPAGTLDAYKSATNWSALADYIEEASE
Physico‐chemical
properties
protein length:295 AA
molecular weight: 31360,59120 Da
isoelectric point:4,67537
aromaticity:0,07797
hydropathy:-0,17831

Domains

Domains [InterPro]
IPR053139
Unmapped
38–270
IPR053139
IPR032675
STR
84–293
IPR032675
SSF52058
STR
108–239
SSF52058
IPR026906
STR
109–235
IPR026906
A0A8S5SDY8
1 295
Architecture
STR
STR 84-293 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
A0A8S5SDY8
1 295
Domain Start End Length (AA) Confidence
N-terminal 1 36 36 0,9306
Central domain 37 267 232 0,9627
C-terminal 268 295 27 0,8406
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-36
Central
37-267
C-terminal
268-295

Taxonomy

  Name Taxonomy ID Lineage
Phage Siphoviridae sp. ctnpt50
[NCBI] 		2827941 Uroviricota > Caudoviricetes >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
DAF48911.1 [NCBI]
Genbank nucleotide accession
BK032577 [NCBI]
CDS location
range 138150 -> 139037
strand -
CDS
ATGGCTAAAAATAATAATTTAAAAGATTTTGTTACCGGTGTCGCAGGGGCAATTCGAGAGAAAAAGGGAACGACCGAATTAATTAATCCTCAAGATTTTGAAAATAAAATCCGCACTATTCAAACTGGCATCGATACATCTGATGCAACTGCTACTGCTGACGACATCCGCCTTGACAAGACCGCGTATGGTGCAGACGGTAAAATGACTGGTACTATTGCGGATTATGACGGCACAAGTGAGCCTGCAAGTGGGAAAAGCCTTTTCCAGCAAAGAGTGGACGGAACCTTGAAAAATGTGACTGCTGATGATTTAGCAGGGATAACAAATATTACAGCAAATGCATTCTACTATTATGACGGACTGATGAACATTACAATTCCAACCAGCGTGAAAAGTATTAGCAAGTCCGCATTCGGAAATTGTGGTAATCTATCAAGTGTCGAGATAGGAACTGGTGTAATGAGCATTGGTGATTCGGCATTCTCCAGTTGCAATAAGTTGAGGGACATTATGATTCCAGACAATGTGACAACCATTGGTGACTCTGTATTCGAATATTGTACTAACATGGTAAGCGTCAAGATAGGAACCGGTATAACAAGTATCAGCGATTTCGAATTCCATTATTGCAGTAACCTGACGAGCGTCACGATTCCGAACAGCGTGACGAGTATCGGCGGTTCTGTGTTCCGTAAGAATTCGACAAGCACGGAGCTTGGCGGAACTTATACTATTTTCGCTACTACTCCTCCTACGATTCAATCCGACACTTTTAAGGATGCTAAAATCAATAAAATTATTGTACCTGCCGGCACACTTGATGCTTATAAATCAGCGACCAACTGGTCGGCGTTGGCTGACTATATTGAGGAGGCAAGCGAATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
4d199778084fabd5b255464e9a771cbbf917441eca4e7b7b254ada9290fcf141
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8775
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50