Protein

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Genbank accession
UAV84793.1 [GenBank]
Protein name
capsid and scaffold protein
RBP type
TSP
Evidence DepoScope
Probability 0,71
Protein sequence
MDSTINGKTVHINNPLDLIGLGRREIEFNIPKADYWEMFKETTQVPTMKRGGYKNLLKGGWVFVDPFNQGKDLWTKDYFTKSGGTVWQTFGASGDIFDSGTYESGYYGFKCPSDKNEEDYVIGDQLSFLQAGKTYTLQFDMKRTTSSIKGDIQNFIVAGTGDWSFIDTSKPFYVNGSLYSTTTDGFISWNDFIDSEDTLWHRCTIIFTCKSPITEPWKRTIRWRAKKDSSWKVKNIMMFEGSELLGTDFRLHDEEYYDWTFYEGIQGMREVSANFGFYYSEDYAFCSAFKVNIHKGFETRGFNPVTQEFECKAEVENFAQIVNPTIKYYQDIKQIPDNVNWNNTIIYNPKPNGIDYLQCKAKGNYMSLYKVRDDNYSSYVPKRWQATFFDSVPSSKWLYGGYCYTGTLQTYEIEN
Physico‐chemical
properties
protein length:415 AA
molecular weight: 48225,35550 Da
isoelectric point:5,27667
aromaticity:0,17108
hydropathy:-0,59976

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UAV84793.1
1 415
Domain Start End Length (AA) Confidence
N-terminal 1 247 247 0,0787
Central domain 248 404 158 0,4319
C-terminal 405 415 10 0,9822
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-247
Central
248-404
C-terminal
405-415

Taxonomy

  Name Taxonomy ID Lineage
Phage Lactococcus phage BIM BV-114
[NCBI] 		2872632 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Lactococcus lactis
[NCBI] 		1358 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UAV84793.1 [NCBI]
Genbank nucleotide accession
MZ955869 [NCBI]
CDS location
range 19781 -> 21028
strand +
CDS
ATGGATAGTACAATAAACGGCAAAACGGTACATATAAACAACCCATTAGACCTTATAGGCTTAGGACGTAGGGAAATCGAGTTTAACATCCCTAAAGCTGATTATTGGGAAATGTTCAAAGAAACCACGCAAGTACCTACAATGAAACGTGGAGGGTATAAAAACTTGCTCAAAGGTGGTTGGGTATTTGTTGACCCTTTTAACCAAGGGAAAGACTTATGGACTAAAGACTACTTCACAAAATCAGGTGGAACGGTATGGCAAACTTTTGGAGCTAGCGGAGATATTTTCGATTCAGGAACTTATGAAAGTGGGTATTATGGTTTTAAGTGTCCTAGTGATAAAAACGAAGAAGATTACGTTATCGGAGACCAACTATCTTTTTTACAAGCAGGAAAGACTTACACTTTACAATTTGACATGAAGCGTACAACCTCCTCTATAAAAGGAGATATACAGAACTTCATAGTAGCAGGAACAGGGGACTGGAGTTTCATAGACACAAGTAAACCGTTTTACGTTAATGGTTCTTTGTATTCAACAACAACTGACGGTTTCATTAGTTGGAATGATTTCATTGATTCAGAAGATACTTTATGGCATAGGTGTACAATTATATTCACTTGTAAAAGTCCTATAACTGAACCGTGGAAACGAACGATACGCTGGAGAGCTAAAAAAGATAGTTCTTGGAAAGTAAAAAACATTATGATGTTCGAGGGTTCTGAATTATTAGGGACTGATTTCAGATTACATGATGAAGAATATTATGATTGGACTTTCTATGAGGGTATACAAGGTATGCGTGAAGTGTCCGCTAACTTTGGTTTTTACTACAGCGAAGACTATGCCTTTTGTTCAGCGTTCAAGGTCAATATACATAAAGGGTTTGAAACAAGAGGTTTTAATCCAGTTACACAAGAGTTTGAATGTAAAGCAGAAGTTGAAAACTTTGCACAAATTGTCAACCCTACAATCAAATACTATCAGGACATTAAGCAAATACCTGATAACGTGAATTGGAATAATACTATCATATACAATCCTAAACCTAACGGAATAGACTACTTACAATGTAAAGCCAAAGGGAACTATATGAGCTTATACAAAGTCAGAGATGATAATTATAGTTCATATGTTCCTAAACGTTGGCAAGCTACATTTTTTGATTCAGTTCCTAGCAGTAAATGGTTATATGGTGGATACTGTTATACTGGTACATTACAAACGTACGAGATAGAAAACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d7cd0ebbed3bb7b31a8ee278e0699e3944e0c528fef7392b58fdfab342f4930d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4175
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50