Protein

View in Explore
Genbank accession
YP_009220360.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,61
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MKQLPSVNLADNALNPYAKQKFVKVQTGQRISTVLREIGYLSGRGASAKRSHPFYVEVNGKPVLFEGWGYRIRASDTVNIVNLPKGGGGGSNPLQIVMMIAVVVAAVYTGGAVGAAYGAGYGAAAQAGVMVAGMAIISLVTPTPSLATNMGKQETSPTYSINAQGNAARLGQAIPVSYGEVNQFPDYAAAPYTEINGSEQYLYQLFVLTQGHTQINQIFIENTPVEQFTGVQMQVVQPGEAVTLFPSNVYTVPEVNNNELVAPNLGGTMVGPFVAVPIGEKANALGFDISFPRGAFRMDSKGKQKSHNLSYMIEYQRLDDTTGNPVGNWILVTNETVTFNTEQPQFRSYRIDVEPGRYQVRAIRLSSNEDNKQIGEIRWANVRSYMPGSQRYGDVTLLAMIIKATNQINQNIQRRVRIRHTRRLRTWNPVDGWSASMSPTRNPAWALADMASNPIYGPGYGASKIDMFELYRLSQVWAQRGDNFDFVFDGQIQFWEALSVVARVGRAYPLMSAGMLSFVRTEPKTMPSFMFSPNNIVKDTFDVEYSFSDGVSTPDYVIAEYTNPETNQPETVDCILPGMAGTRPGTLKLLGCTSRDQAWREGISLAAANRDQRKVINFTTERAGSIPRVGDLVRVSHDMPAWGYSGKVLGFNPTSDTIEIHDDKGNVIDTMLPFELRTTEDMPFLPGIQHSIAFQKRNGAPDGPHRALIHPSGDRKKCIISTANPRSIYISDGIRQEMTGYQFGPDERRGLSAIVISAAPDERGRVRMALTNYAESVHTAETGSAPLPGPDSNLPEANAAPIIDSVKFEPSAYSGEYFLRATPANGASYYEFQTSVNGTQWQSAGVSPDPYIKLYLSPGTYWGRVRAFGRAMGPWATTQQVLDGTVLPIPEIIAASATQNNFDTIVFSWVVDPDMEHAVSKFHVFYSTNDTDRESSVSVGSSGRSFTYHTDKFASERWFWIQVEDTDGRLGQIKGPYYGKSTSDANYALDMLEGEIGQNQFVQALNEKIDRIDTLTGDVEGLWAGIEHERQERVNADSALASDILDVQAGVGETMAAVQVVAQAQSDFQGKVAANYAIKVQVDANGNKYAAGMSLDVSESVGGDYQSTVAFVADRFVIMNQIGGSLQSPFMVVNGQVLIRQALIGDAWITNAHIQNAAITNAKIADAQITASKIGYAQINNTHIADAQITMAKIGVAQIDTLRLTSGAVTTGQSFGFSIQVGRSSGTDAYAYAVYMPYGGTGMIFMNYSFVADWQNSRCYARCDTDGYLFLDSQMILTSEGKPEWQPNHRASYITATYGGAFNFQVTVWCQRPVTGYNYYSGRIAMLGLQR
Physico‐chemical
properties
protein length:1331 AA
molecular weight: 145651,03560 Da
isoelectric point:5,67858
aromaticity:0,09992
hydropathy:-0,24688

Domains

Domains [InterPro]
DC_0129
STR
1–1120
DC_0129 G3DSA:2.160.10.20
NF040662
Unmapped
279–778
NF040662 IPR053171 DC_1302
IPR055385
ATT
280–385
IPR055385 IPR015406
YP_009220360.1
1 1331
Architecture
STR
ATT
STR
RBD
STR 1-279 | ATT 280-385 | STR 386-1120 | RBD 1121-1331
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009220360.1
1 1331
Domain Start End Length (AA) Confidence
N-terminal 1 642 642 0,7595
Central domain 643 1198 557 0,1153
C-terminal 1199 1331 132 0,9661
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-642
Central
643-1198
C-terminal
1199-1331

Taxonomy

  Name Taxonomy ID Lineage
Phage Achromobacter phage phiAxp-1
[NCBI] 		1610509 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Achromobacter xylosoxidans
[NCBI] 		85698 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009220360.1 [NCBI]
Genbank nucleotide accession
NC_029033.1 [NCBI]
CDS location
range 36933 -> 40928
strand +
CDS
ATGAAACAGCTACCTAGCGTTAACCTTGCCGATAACGCATTGAACCCGTATGCGAAGCAAAAGTTCGTCAAAGTGCAGACGGGCCAACGCATCAGTACGGTGTTGCGCGAAATCGGCTATCTGTCCGGCCGTGGTGCCAGCGCGAAACGCTCGCATCCGTTCTACGTCGAAGTGAACGGAAAGCCCGTCCTGTTCGAAGGCTGGGGCTATCGCATTCGCGCATCGGATACCGTGAACATCGTCAACCTGCCGAAGGGTGGTGGCGGTGGCTCGAACCCGCTGCAAATCGTCATGATGATCGCGGTTGTCGTGGCCGCTGTCTACACCGGTGGCGCTGTGGGCGCTGCGTACGGCGCGGGCTATGGTGCAGCCGCCCAGGCGGGCGTTATGGTCGCAGGTATGGCGATTATCTCGCTGGTGACGCCTACGCCGTCGCTCGCAACGAACATGGGCAAGCAAGAAACGTCCCCTACGTACAGCATCAACGCCCAGGGCAACGCGGCGCGACTCGGGCAAGCTATCCCTGTTTCGTATGGCGAAGTGAATCAATTCCCCGACTATGCCGCCGCACCCTATACCGAAATCAACGGGTCCGAACAATACCTGTACCAACTTTTCGTATTGACGCAAGGCCATACGCAAATCAACCAAATTTTCATCGAGAACACCCCGGTCGAACAATTCACGGGCGTTCAGATGCAAGTCGTACAGCCCGGCGAAGCCGTTACCCTGTTCCCCTCGAACGTCTACACGGTCCCCGAGGTGAACAACAACGAACTCGTCGCGCCGAATCTTGGAGGAACGATGGTCGGCCCGTTCGTCGCCGTACCCATCGGTGAAAAGGCGAACGCACTCGGGTTCGATATATCGTTCCCGCGTGGCGCGTTCCGCATGGACAGCAAGGGCAAACAGAAGTCGCATAATCTGTCGTACATGATCGAGTATCAGCGACTGGACGACACGACCGGCAACCCCGTCGGCAACTGGATTCTCGTAACGAACGAAACTGTCACGTTCAACACTGAGCAACCGCAGTTCCGCTCATACCGTATCGACGTTGAACCGGGCCGCTATCAGGTCCGCGCCATTCGCCTATCGTCGAACGAAGACAACAAGCAAATCGGCGAAATCCGATGGGCGAACGTTCGGTCGTACATGCCCGGTTCACAACGCTACGGCGATGTAACGTTGCTGGCGATGATCATCAAGGCAACGAACCAAATCAACCAAAATATCCAACGTCGTGTTCGTATTCGCCACACACGCCGGTTGCGTACGTGGAACCCGGTAGACGGATGGTCGGCCAGCATGTCGCCCACGCGCAATCCGGCATGGGCGCTCGCCGACATGGCTTCGAATCCGATCTATGGTCCGGGCTATGGTGCGTCGAAAATCGACATGTTCGAACTCTATCGCCTGTCGCAAGTATGGGCGCAACGCGGCGACAACTTCGACTTCGTGTTCGACGGTCAAATCCAGTTTTGGGAAGCGTTGTCGGTCGTCGCTCGCGTAGGGCGTGCATATCCGCTCATGAGCGCGGGCATGCTGTCGTTCGTCCGCACCGAACCCAAGACGATGCCGTCGTTCATGTTCTCGCCGAACAACATCGTTAAGGATACGTTCGACGTTGAATACTCGTTCAGCGATGGCGTATCGACGCCGGACTACGTGATCGCCGAATACACGAACCCCGAAACGAATCAGCCCGAAACCGTCGATTGCATCCTGCCCGGGATGGCCGGAACTCGCCCCGGCACGCTCAAGCTGCTGGGATGCACCAGCAGGGATCAAGCATGGCGCGAAGGTATCTCGCTGGCTGCTGCGAACCGCGATCAGCGTAAGGTGATCAACTTCACGACCGAACGCGCCGGGTCTATCCCGCGTGTGGGCGACCTTGTGCGCGTGTCTCACGATATGCCTGCCTGGGGCTACAGCGGTAAGGTGCTTGGCTTCAATCCGACTTCGGACACTATCGAAATTCACGACGACAAGGGTAACGTGATCGATACCATGTTGCCGTTCGAGCTTCGCACGACCGAAGACATGCCGTTCCTGCCCGGCATTCAACACAGCATCGCATTCCAGAAGCGAAACGGCGCACCGGATGGCCCGCACCGGGCTTTGATTCACCCCAGCGGCGACCGCAAAAAGTGCATCATTTCCACCGCGAACCCGCGTTCGATTTACATCAGCGACGGCATTCGCCAGGAAATGACCGGATATCAATTCGGTCCCGATGAGCGTCGCGGACTATCTGCCATCGTGATCAGCGCGGCTCCCGATGAACGCGGCCGAGTGCGCATGGCGTTGACGAACTACGCCGAATCGGTCCACACCGCCGAAACCGGCAGCGCGCCGCTACCCGGCCCGGATTCGAACTTGCCCGAAGCGAACGCCGCGCCAATCATCGACTCGGTTAAATTCGAGCCGTCCGCATACAGTGGCGAATATTTCCTTCGCGCTACCCCGGCGAACGGTGCGTCCTACTACGAGTTTCAAACGTCGGTCAACGGCACGCAGTGGCAATCGGCCGGTGTATCGCCCGATCCGTACATCAAACTGTACCTGTCCCCCGGCACCTATTGGGGTCGCGTGCGTGCGTTTGGTCGTGCGATGGGACCATGGGCCACGACGCAGCAAGTTCTGGACGGAACGGTTCTCCCGATCCCCGAAATCATCGCCGCAAGCGCAACGCAAAACAACTTCGATACTATCGTGTTTTCCTGGGTCGTCGATCCCGACATGGAACACGCCGTTTCGAAGTTCCATGTGTTCTACAGCACGAACGATACGGATCGCGAATCGTCGGTGTCGGTCGGATCGAGCGGCCGAAGCTTCACTTATCACACCGATAAATTCGCATCCGAACGCTGGTTTTGGATTCAGGTCGAAGATACTGACGGGCGTCTAGGTCAAATCAAGGGTCCGTATTACGGCAAATCGACCTCCGATGCCAATTACGCACTCGACATGCTGGAAGGTGAAATCGGTCAGAATCAATTCGTACAAGCCCTGAACGAAAAGATCGACCGCATCGATACCCTTACCGGCGATGTTGAGGGGCTGTGGGCGGGAATCGAACACGAACGGCAAGAACGCGTGAACGCTGATTCCGCACTCGCAAGCGACATTCTCGATGTGCAGGCGGGCGTCGGCGAAACCATGGCCGCAGTCCAGGTCGTGGCGCAAGCGCAATCCGATTTTCAAGGCAAGGTCGCAGCGAACTACGCTATTAAAGTTCAAGTTGACGCGAACGGCAACAAGTACGCGGCAGGCATGTCCCTGGACGTGTCTGAAAGCGTAGGCGGGGATTATCAATCGACCGTTGCATTTGTGGCTGATCGTTTCGTCATCATGAACCAAATTGGCGGTTCGCTACAATCGCCGTTTATGGTCGTCAACGGTCAGGTGCTGATTCGTCAAGCGTTGATCGGTGACGCCTGGATTACGAACGCGCATATCCAAAACGCAGCGATCACGAACGCCAAGATTGCAGACGCACAAATCACGGCATCTAAGATCGGTTACGCTCAAATCAACAACACGCACATCGCAGACGCACAAATCACGATGGCGAAGATCGGCGTAGCGCAAATCGATACGTTGCGCCTAACGTCAGGTGCAGTGACGACCGGACAATCGTTCGGATTCTCGATTCAAGTCGGCCGCAGTAGCGGTACGGACGCTTACGCCTATGCTGTGTACATGCCGTACGGCGGAACCGGGATGATCTTCATGAACTATTCGTTCGTGGCCGATTGGCAAAACTCGCGCTGCTACGCACGATGCGATACCGACGGATATTTGTTCTTGGATAGTCAGATGATATTGACTTCCGAAGGCAAGCCCGAATGGCAACCCAATCATAGGGCGAGCTATATCACCGCAACGTACGGAGGGGCGTTCAACTTTCAAGTTACAGTATGGTGCCAGCGTCCAGTCACCGGCTATAATTACTACTCCGGCCGAATCGCCATGCTAGGACTGCAACGATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
08b6b9757f710d3c6a7c9a4053c052db8e7e650687b0d26e9157d9c8f490b4c4
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7112
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50