Protein

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Genbank accession
QLF85738.1 [GenBank]
Protein name
non-contractile tail tubular protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,59
Protein sequence
MALISQSIKNLKGGISQQPDILRYPDQGSRQVNGWSSETEGLQKRPPMVFLKTLGGSGDLGQAPLIHLINRDEYERYYAVFTGSTIRVFDLAGNEKQVRFPTGAAYVQTANPRNDLRMVTVADYTFVVNRNVTVTESTEISTGGNFRDKGDALINVRGGQYGRTLKVLINGTVYASYTIPNGSAPEHVNNTDAQWLANELATQLRNNLGPHGWTFNVGQGFIHVIAPANGEVAYISTEDGYADQLINPVTHYAQSFSKLPPNAPDGYMVKIVGDSSKSADQYYVQYDSSRKVWKEVVGWNTKLHYTHDTMPHALIRASDGNFEFKTISWNPRVCGDADTNPYPSFVGSTINDVFFFRNRLGFLSGENIILSRTAKYFNFFPASVANLSDDDPIDVAVSTNRIAILKYAVPFSEELLIWSDEAQFVLTASGTLTSKSVELNLTTQFDVQDRARPFGIGRNVYFASPRSSFTSIHRYYAVQDVSSVKNAEDITAHVPNYIPNGVFSICGSGTENFCSVLSHGDPSKIFMYKFLYLNEELRQQSWSHWDFGANVQVLACQSINSDMFIILRNEFNTFLARVSFTKNAIDLQGEPYRAFMDMKIRYTIPSGTYNDDTYETSIHIPTIYGANFGRGKITVLEPDGKITVFEQPTAGWNNDPWLRLSGNLEGRTVYIGFNINFVYEFSKFLIKQTADDGSTSTEDIGRLQLRRAWVNYEESGTFDIYVENQSSNWKYTMAGARLGSNTLRAGRLNLGTGQYRFPVVGNAKFNTVSILSDETTPLNIIGCGWEGNYLRRSSGI
Physico‐chemical
properties
protein length:796 AA
molecular weight: 88947,41340 Da
isoelectric point:5,97278
aromaticity:0,12060
hydropathy:-0,32249

Domains

Domains [InterPro]
IPR058003
TTP
1–796
IPR058003
QLF85738.1
1 796
Architecture
TTP
TTP 1-796
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QLF85738.1
1 796
Domain Start End Length (AA) Confidence
N-terminal 1 138 138 0,9878
Central domain 139 349 212 0,4389
C-terminal 350 796 446 0,2184
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-138
Central
139-349
C-terminal
350-796

Taxonomy

  Name Taxonomy ID Lineage
Phage Serratia phage vB_SmaP-UFV01
[NCBI] 		2749302 Uroviricota > Caudoviricetes > Autographivirales > Studiervirinae > Teseptimavirus
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QLF85738.1 [NCBI]
Genbank nucleotide accession
MT543041 [NCBI]
CDS location
range 23872 -> 26262
strand +
CDS
ATGGCACTCATTAGCCAATCAATCAAGAACTTGAAGGGTGGTATCAGTCAACAGCCTGACATCCTTCGTTATCCCGACCAAGGGTCACGCCAAGTTAACGGTTGGTCTTCGGAGACCGAGGGCCTCCAAAAGCGTCCACCTATGGTTTTCCTTAAGACACTGGGAGGAAGTGGTGACTTAGGACAAGCACCTCTCATTCACCTGATAAACCGTGACGAGTACGAGCGGTACTACGCAGTGTTTACCGGAAGTACCATCCGAGTTTTTGATTTAGCTGGTAACGAGAAACAAGTGCGTTTCCCTACAGGGGCAGCGTATGTACAGACAGCTAACCCAAGGAATGACCTTCGGATGGTAACAGTTGCCGACTACACGTTTGTCGTTAACAGGAACGTCACAGTAACCGAGTCCACAGAAATTTCAACTGGTGGTAACTTTCGAGATAAAGGTGATGCGCTGATTAACGTGCGAGGTGGTCAGTATGGAAGAACGTTGAAGGTGCTGATTAATGGTACAGTATATGCATCGTACACAATCCCTAACGGGTCCGCTCCAGAACACGTCAACAATACTGATGCTCAATGGCTGGCTAACGAGTTGGCTACTCAACTCAGGAACAACCTAGGACCCCACGGGTGGACATTCAACGTTGGTCAAGGGTTCATTCATGTAATAGCTCCTGCAAATGGTGAGGTAGCCTACATATCAACCGAGGATGGATACGCAGACCAGCTAATTAACCCTGTCACTCACTATGCTCAGTCGTTCTCTAAGTTGCCACCAAATGCTCCAGACGGCTACATGGTTAAGATTGTGGGAGATTCCTCAAAGTCCGCTGACCAGTATTACGTTCAGTATGATTCCAGTCGTAAGGTATGGAAGGAAGTTGTTGGGTGGAACACTAAGCTGCACTACACTCATGATACGATGCCTCACGCTCTCATTAGGGCCTCTGATGGTAACTTTGAGTTCAAGACCATCTCGTGGAACCCTAGGGTGTGCGGTGATGCTGATACTAACCCGTATCCTTCATTCGTAGGCTCTACGATTAATGATGTCTTCTTCTTCCGTAACCGTTTAGGATTCCTTAGCGGAGAGAACATCATATTGAGTCGTACTGCAAAATACTTCAACTTCTTCCCAGCGTCGGTTGCTAACCTAAGTGATGACGACCCTATAGACGTAGCTGTGAGTACCAACCGAATAGCAATCCTTAAGTACGCCGTTCCGTTCTCAGAAGAGTTACTCATCTGGTCCGATGAAGCACAATTCGTCCTGACTGCTTCTGGGACTCTCACGTCGAAGTCGGTTGAGTTGAACCTAACGACTCAGTTTGACGTACAGGACCGAGCGAGACCTTTTGGGATTGGACGAAATGTCTACTTTGCTAGTCCGAGGTCCAGCTTCACGTCCATCCACAGATACTATGCTGTGCAGGACGTAAGTTCCGTTAAGAACGCTGAGGACATTACAGCACATGTTCCCAACTACATTCCAAATGGTGTGTTTAGTATTTGTGGTAGTGGTACCGAAAACTTCTGTTCTGTACTATCTCACGGGGACCCTAGCAAAATATTCATGTACAAATTCCTGTACCTTAACGAAGAGCTAAGGCAACAGTCGTGGTCTCACTGGGACTTTGGGGCAAACGTGCAGGTTTTGGCATGTCAGAGCATCAACTCAGATATGTTCATTATTCTACGTAACGAGTTCAATACGTTCCTTGCGAGAGTTTCCTTTACGAAGAACGCCATTGACTTACAGGGAGAACCCTATCGGGCCTTTATGGATATGAAGATTCGCTACACGATTCCAAGCGGAACGTACAACGATGACACCTACGAAACTTCCATTCACATACCAACCATTTATGGTGCGAACTTCGGGAGGGGCAAAATCACTGTATTGGAGCCTGATGGTAAGATAACAGTATTTGAGCAACCAACTGCTGGGTGGAACAATGACCCATGGTTGAGGCTTAGTGGTAACTTAGAGGGACGCACGGTGTACATTGGGTTCAACATCAACTTCGTCTATGAGTTCTCTAAGTTCCTCATCAAGCAAACTGCCGACGATGGGTCAACCTCAACGGAAGACATTGGTCGCTTGCAGTTACGCCGAGCGTGGGTTAACTATGAGGAGTCTGGTACGTTTGACATTTATGTTGAGAACCAATCATCCAACTGGAAGTATACGATGGCTGGTGCTCGCTTAGGCTCTAACACTCTGAGGGCTGGGCGATTGAACTTAGGGACAGGACAATACCGATTCCCTGTGGTTGGTAACGCCAAGTTCAATACCGTGTCTATCTTGTCTGACGAGACTACCCCGCTGAACATCATTGGGTGTGGCTGGGAAGGTAACTACTTACGGAGAAGTTCCGGTATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
285352aa268f22a0123eab31e505f02cbd0d083092d5bb15208c2fb58ac86ff9
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3370
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A highly specific Serratia-infecting T7-like phage inhibits biofilm formation in two different genera of the Enterobacteriaceae family Vieira,M.S., Duarte da Silva,J., Ferro,C.G., Cunha,P.C., Vidigal,P.M.P., Canedo da Silva,C., Oliveira de Paula,S. and Dias,R.S. 2021 34333135 GenBank