Protein

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Genbank accession
YP_009830577.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,80
Protein sequence
MIPENRLSTEPVPGRLIHDLGVETSPVLDYKPGGIAIQDPTKGLDYQIWRGRVFSPNTDQSRIVIDGRFSPEYEILQYPYICEFNFSFDFNMRPLAVFLANEILEVGGKEVPVQNCYLYWFDNTLGDFDLIFLGSVIRTPKLLIDDPRMEESNFYSLSDVCLFYWNNGNLYVRYLRDRFTEEHLLKRNVPYVQRVGMNEYYRLQFEFFRQADVCER
Physico‐chemical
properties
protein length:216 AA
molecular weight: 25534,70920 Da
isoelectric point:4,81014
aromaticity:0,15278
hydropathy:-0,30972

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009830577.1
1 216
Domain Start End Length (AA) Confidence
N-terminal 1 32 32 0,5464
Central domain 33 205 174 0,2984
C-terminal 206 216 10 0,9864
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-32
Central
33-205
C-terminal
206-216

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage ZC08
[NCBI] 		1622116 Uroviricota > Caudoviricetes > Schitoviridae > Zicotriavirus ZC08 >
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009830577.1 [NCBI]
Genbank nucleotide accession
NC_048639.1 [NCBI]
CDS location
range 6701 -> 7351
strand +
CDS
ATGATCCCTGAAAACAGGCTATCTACGGAGCCTGTTCCAGGCAGGCTGATTCATGATCTGGGGGTGGAAACATCCCCAGTTCTAGATTACAAGCCGGGGGGTATTGCTATTCAAGATCCTACAAAAGGACTTGATTATCAGATTTGGCGTGGAAGAGTTTTCAGTCCAAATACTGATCAATCTAGAATTGTCATTGATGGTAGGTTCTCACCTGAATACGAAATACTCCAATACCCGTACATCTGCGAATTCAATTTCTCATTCGATTTCAATATGAGACCTTTGGCTGTATTTCTTGCCAATGAGATATTGGAGGTTGGAGGGAAAGAAGTACCAGTACAGAATTGTTACTTGTACTGGTTCGATAATACCCTAGGAGACTTTGATTTAATCTTTCTTGGTTCTGTAATCAGGACACCAAAACTCTTGATAGACGACCCTAGAATGGAAGAATCCAATTTCTATAGTCTTTCAGATGTTTGCCTGTTTTACTGGAATAATGGAAATCTCTATGTGAGATACCTTAGGGACAGATTTACAGAAGAACACCTACTGAAAAGAAATGTACCTTACGTTCAAAGAGTAGGCATGAATGAATATTACCGGCTACAGTTTGAGTTCTTCAGACAAGCCGATGTTTGCGAAAGATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
713ddd3c6da1af8f0c55ed39d1272ee620e03688ec212945ff9be634a24c1131
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4217
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50