Protein

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Genbank accession
UAG58400.1 [GenBank]
Protein name
putative structural protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,68
Protein sequence
MSEKLKFTGDAMDVGGLMIKNVTPGTGDKDVVTKGQMEAFMKNWMENKLYRIGSYYITEEDINPGDSISLGFGSWAKVTGVIMGTGVVNPDGSVPNAQRVEFQAGGTGGRVFNTIRTENVPLMTVNGSSFSLSSNTHSHNMVFGRGDASGHNSSPNWYSPGGGYSQRTDNDTHTHTISGSVSLGRDDISRQPINTLPPFRAAHIWRRIS
Physico‐chemical
properties
protein length:209 AA
molecular weight: 22604,90820 Da
isoelectric point:7,02475
aromaticity:0,08134
hydropathy:-0,48565

Domains

Domains [InterPro]
DC_0348
RBD
4–209
DC_0348
IPR053827
ATT
47–208
IPR053827
UAG58400.1
1 209
Architecture
RBD
ATT
RBD 4-46 | ATT 47-209
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UAG58400.1
1 209
Domain Start End Length (AA) Confidence
N-terminal 1 42 42 0,9543
Central domain 43 198 157 0,0081
C-terminal 199 209 10 0,9955
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-42
Central
43-198
C-terminal
199-209

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage FS2B
[NCBI] 		2830470 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UAG58400.1 [NCBI]
Genbank nucleotide accession
MW929182 [NCBI]
CDS location
range 4147 -> 4776
strand +
CDS
ATGTCAGAGAAGCTCAAGTTTACTGGCGATGCAATGGATGTTGGTGGTCTTATGATCAAGAATGTTACTCCGGGAACTGGTGACAAGGATGTTGTTACTAAAGGCCAGATGGAAGCGTTCATGAAGAACTGGATGGAGAATAAGCTCTATCGAATTGGTTCTTACTACATCACTGAAGAAGACATTAACCCCGGTGATTCAATCTCCTTAGGGTTTGGCTCTTGGGCTAAAGTGACTGGTGTTATCATGGGTACTGGTGTAGTAAACCCTGATGGTTCTGTTCCTAACGCTCAAAGAGTTGAGTTCCAAGCAGGTGGTACTGGTGGTCGTGTCTTCAATACTATTCGAACTGAGAACGTACCTTTGATGACAGTTAATGGCTCCAGCTTCTCTCTATCCAGTAATACTCACAGTCACAACATGGTATTTGGTCGTGGAGATGCTAGTGGTCATAACAGCTCGCCAAACTGGTATAGTCCGGGTGGTGGATACAGTCAGAGAACTGATAATGATACTCACACTCATACAATCTCTGGTAGTGTAAGTCTTGGTCGTGATGATATCTCTCGTCAACCTATTAACACTTTGCCACCATTCAGAGCAGCTCACATTTGGAGACGTATTAGCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d7bd4198a025f82adf302b2ffe8d2b231f99e7078cb54bc376171ca4c8839131
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7195
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of a newly isolated Podoviridae phage against E.coli causing urinary tract infections Malik,S., Nehra,K., Rana,J.S. and Mann,A. 2019-09-07 — GenBank