Protein

View in Explore
Genbank accession
XCO40918.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,87
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MTNIKARKGGSSSPRTPVEMPDNLISKDKVKLLLAVSDGEVVNDFSMKQLHFGGVPVQNEDGTFNYEGVIAEFRPGTQTQDYIQGFSESSAEFQVAREVTHNTPYTLTVSNKNLSAIRFRLLWPRVLKQKDNGDMVGSVVEYKIEMAVDGASYQTYLTGKIDGKNTTGGYDRSIRVNLPQNFTSQVLIRVSRVTPDSDGVKVVDAFQVQSYAEVIDAKFRYPLTAMLYVEFDSDLFQNQIPTISLKKKWKIIQVPSNYDPINRTYSGTWDGVFKWAWSNNPAWVLYDLIMNQRYGLDQRELGIPVDKWSLYEVAQYCDELVPDNRGGMEPRYLMDVVVQSQVEAFQLVRDICSAFRGMTFYNGESLSIIVDKPRDPVYLFTADNVVDGVFVRTFPSEKTMYTSCNVMFDDEENQYEQDVEPVFNPDAAMRFGHNPTSITAIGCTRRTEANRRGRWILQTNLSATTVSFSTGLEGMIPSCGDVIYVADPHWQSAFNLVLSGRIMEVTGTQVFLAFRCDAKAGDTLILNTDDGKPVRRTIASVSADGKTLTLNVGYNFDVAPDSVFLIESDQLAAEQYVVTRIEKGSDDDEFTFAITATQYNPNKYDAIDNGVITDDRPTSVVDPDSMGAPKDLTISSFSRIVQGMSVETMVIGWSAVQYAKLYEVQWRKDGGNWNNVPRTATTQVDIEGIYAGEYQARVRCISGGNVASPWSALATATLTGKVGAPKGPINLFASDNEIFGIRVKWAMPEGAEDTAYIELYQSQSGTDQDASLLTLIPYPAAEYWHSILPAGYVNFYKARSVDRIGNVSEWTDYARGMSSTDVNIITDAILDEILDSDAMKELQESAQDSAAKLNDYANSIIQNALANDADVRKMTKENGKRKAEIAHTTVLIANESEARAAEITELKTQIDEDITSQITILNESLANESETRATQINQLQTQFGEDMAAGLAQVNEAIANESEARATSEAALDAKIGQNSAALDQKLDSWANVNGVGSMYTMKLGLKYNGQEYSSGMALQLTAQGSNIVSQVLFIADRFAIIRNAASGSYTLPFVVQNDQVFMNNALIQDGSITNAKIGNVIQSNNFQENVAGWRLDKNGVFVNYGSTSGEGSIKQTNQNITVRDGSGRVRCQLGRITGAW
Physico‐chemical
properties
protein length:1141 AA
molecular weight: 126072,59050 Da
isoelectric point:4,72834
aromaticity:0,09027
hydropathy:-0,31060

Domains

Domains [InterPro]
DC_0014
STR
1–1141
DC_0014
IPR053171
Unmapped
3–874
IPR053171 IPR015406
IPR055385
ATT
90–217
IPR055385 IPR032876 IPR013783 Coil
IPR036116
STR
629–716
IPR036116
XCO40918.1
1 1141
Architecture
STR
ATT
STR
ATT
STR
STR 1-89 | ATT 90-217 | STR 218-340 | ATT 341-489 | STR 490-1141
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XCO40918.1
1 1141
Domain Start End Length (AA) Confidence
N-terminal 1 501 501 0,8879
Central domain 502 1003 503 0,0634
C-terminal 1004 1141 137 0,3634
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-501
Central
502-1003
C-terminal
1004-1141

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage phi1_146047
[NCBI] 		3232226 Viruses >
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XCO40918.1 [NCBI]
Genbank nucleotide accession
PP889496.1 [NCBI]
CDS location
range 16249 -> 19674
strand +
CDS
ATGACTAATATCAAGGCCCGCAAGGGTGGCTCAAGTTCGCCGCGTACTCCCGTAGAAATGCCAGATAACCTGATCTCGAAAGATAAGGTTAAATTGTTGCTTGCTGTTTCTGATGGTGAGGTGGTTAACGACTTCAGCATGAAGCAATTGCATTTTGGAGGCGTCCCGGTTCAGAACGAAGATGGAACTTTCAACTATGAAGGCGTAATCGCTGAGTTCCGCCCCGGCACGCAAACGCAGGACTATATCCAAGGTTTCAGCGAGTCAAGCGCTGAATTCCAGGTTGCTCGTGAAGTCACTCACAACACGCCTTATACGCTTACCGTATCGAACAAGAATCTTTCTGCCATTCGCTTTCGCCTGTTATGGCCCCGCGTTCTGAAGCAAAAAGATAACGGCGATATGGTCGGATCGGTTGTTGAGTACAAGATCGAGATGGCGGTAGATGGTGCAAGTTATCAGACCTACCTAACTGGCAAAATTGACGGCAAGAACACGACTGGCGGTTACGATCGGAGCATTCGCGTTAACCTGCCGCAAAACTTCACGTCGCAGGTTCTTATCCGCGTGAGCAGAGTAACGCCGGACTCTGACGGGGTAAAGGTTGTCGATGCCTTCCAGGTTCAATCCTACGCTGAAGTTATTGACGCAAAATTCCGCTACCCGTTAACGGCCATGCTTTACGTTGAGTTCGATAGCGATCTGTTCCAGAACCAGATTCCCACCATCTCACTCAAAAAGAAATGGAAGATTATCCAGGTTCCGAGTAATTACGATCCGATTAATCGCACATACTCCGGGACGTGGGACGGTGTTTTTAAGTGGGCGTGGAGCAATAACCCGGCATGGGTGCTTTATGACCTGATCATGAATCAGCGCTATGGTTTAGACCAGCGCGAACTTGGCATCCCGGTTGACAAGTGGTCGCTGTACGAGGTGGCGCAATACTGTGATGAGCTTGTGCCGGACAATCGCGGCGGGATGGAACCGCGCTATTTGATGGATGTGGTTGTTCAGTCGCAGGTTGAGGCGTTCCAGTTAGTAAGGGATATTTGTTCCGCATTCCGTGGAATGACGTTCTACAACGGTGAAAGCCTTTCGATTATCGTCGACAAGCCGCGCGATCCGGTGTACCTGTTTACGGCTGATAACGTCGTTGATGGCGTGTTCGTTCGGACGTTCCCAAGCGAAAAGACGATGTATACGTCGTGCAACGTCATGTTCGACGACGAAGAAAACCAGTACGAACAGGATGTTGAACCAGTATTCAACCCGGACGCAGCCATGCGGTTCGGCCACAACCCAACGAGCATTACAGCGATCGGGTGTACCAGAAGGACGGAGGCGAACCGCCGTGGGCGCTGGATTCTGCAAACGAACCTAAGCGCTACAACCGTTTCGTTTTCGACTGGCCTGGAAGGTATGATTCCTTCTTGCGGCGATGTAATTTACGTTGCAGATCCGCACTGGCAATCGGCCTTTAACCTGGTGCTTTCGGGGCGAATCATGGAAGTAACGGGAACGCAGGTTTTTCTGGCTTTCCGCTGCGACGCGAAGGCTGGCGACACTCTGATCCTGAACACTGACGACGGCAAGCCTGTGCGACGCACAATCGCCAGCGTTTCGGCTGACGGTAAGACACTCACGCTAAACGTTGGGTATAACTTTGACGTTGCGCCTGACAGTGTATTCCTGATCGAGAGCGATCAGCTTGCAGCGGAACAGTATGTAGTAACCCGGATTGAAAAGGGTAGTGATGACGACGAATTCACCTTTGCTATCACGGCTACGCAGTACAACCCGAACAAGTATGACGCGATCGACAACGGAGTAATTACCGACGACCGACCAACTTCGGTTGTTGACCCGGATTCAATGGGCGCTCCGAAAGACTTAACGATTAGCTCGTTTTCTCGAATTGTTCAGGGAATGAGCGTCGAGACGATGGTGATCGGCTGGTCTGCCGTGCAGTATGCAAAACTGTACGAGGTGCAATGGCGCAAAGATGGCGGTAACTGGAACAACGTTCCTCGCACTGCGACAACGCAGGTTGATATTGAAGGCATCTATGCTGGCGAGTATCAGGCACGCGTGAGGTGCATTAGCGGCGGGAATGTAGCGTCTCCGTGGTCTGCATTGGCAACCGCTACACTGACCGGGAAAGTCGGAGCGCCAAAAGGCCCGATTAACCTTTTTGCGTCGGACAATGAGATCTTCGGCATTCGCGTTAAGTGGGCCATGCCAGAAGGGGCGGAAGACACGGCATACATTGAGCTTTACCAGTCGCAAAGCGGAACCGATCAGGACGCAAGCCTGCTTACACTGATTCCTTACCCGGCGGCTGAATACTGGCATTCAATTTTGCCCGCTGGCTACGTGAACTTCTACAAAGCCAGAAGCGTAGACCGGATCGGCAACGTTTCAGAGTGGACTGATTACGCTCGCGGTATGTCTTCGACTGACGTTAACATCATCACAGATGCGATCCTGGATGAAATCCTGGACAGCGACGCGATGAAGGAGCTTCAGGAGAGTGCGCAGGATAGCGCGGCAAAACTCAATGACTACGCGAACAGCATCATTCAGAACGCTTTGGCGAACGATGCAGATGTTAGGAAAATGACGAAGGAGAACGGGAAGCGGAAGGCAGAGATTGCGCATACGACAGTCCTGATCGCCAACGAATCCGAAGCGAGGGCGGCTGAAATTACGGAGCTTAAAACGCAGATTGATGAAGATATCACATCGCAGATTACGATCCTTAATGAATCTCTGGCGAATGAGAGCGAGACGCGAGCAACGCAAATTAACCAGTTGCAAACGCAATTTGGCGAGGATATGGCCGCCGGGTTAGCGCAGGTTAACGAAGCTATCGCAAACGAGAGCGAGGCGCGGGCAACATCCGAGGCGGCGCTAGATGCCAAAATCGGGCAAAACTCCGCAGCGCTAGATCAGAAACTCGACTCGTGGGCAAACGTTAATGGCGTTGGTTCCATGTATACGATGAAGCTGGGCTTGAAGTACAACGGCCAGGAGTATAGCTCCGGGATGGCGCTACAGCTTACAGCGCAAGGGAGCAACATTGTTTCGCAGGTGCTGTTCATTGCTGATAGATTTGCTATCATCCGTAATGCAGCGTCGGGATCTTACACGTTGCCGTTCGTTGTACAGAATGACCAGGTGTTCATGAATAACGCGCTTATTCAGGACGGTTCGATTACCAACGCGAAGATCGGTAACGTCATTCAGTCCAACAACTTTCAGGAGAATGTTGCAGGATGGAGGCTTGATAAAAACGGCGTATTTGTCAACTATGGTTCAACATCTGGCGAAGGTTCCATCAAGCAAACTAACCAGAACATCACGGTTCGAGATGGTAGCGGCCGCGTTCGTTGCCAGTTGGGTAGAATCACTGGCGCATGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
0211e229880b233141ab44f476fbfbb15c07c4b9d6bbeec50c2e748367721616
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7798
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The complete genome of Klebsiella pneumoniae phages Fang,Q., Luo,H., Feng,Y. and Zong,Z. 2016-02 — GenBank