Protein
View in Explore- Genbank accession
- WGV35678.1 [GenBank]
- Protein name
- tail spike protein
- RBP type
-
TFTSPTSPTSP
- Protein sequence
-
MNILRSFTETVVTTPTDTFPISFEYDEKYDAVHVFLNDVAVEDLGYTVSQINAVTLKVEPAIPEGTVRIERETDIDKMKYIFDAGALFIDQNVDADFKQIVHSQQEVRDGFIKLRGDVLPLVHSLQEALKQAQESSEAAQEAADAAEEAAALVSGAVTSVKTITDLKALPAWEGRVVVMQGHTELGKKSTIFRYDTTNTDTPNNYSVIKPNTGTGNWLALDTAVYESSQLGCGVAVTNNDVLINPLLATSGSITIREELPTTNPIVVQDYNDIRGLGTRAGFRYNGPSGTADTLEGRLPVVKLFKDNAQAVKQSRLENLTVHANYKPYVTAVDARYLTGQSKLRELIIRGVTDTSVGLVLNKMWYDKISDVFISGYDPSKPAGSRWGTGVVIESKYSSDPASPDYGAQINALTVDVSCHSLKVGYLIRPNNYIYGLNINTMPTVENCDIGFKMESAPASVDYQVRQSCISAYFENNGIDIQWGTPSTTKARNSKHVWLNCSFDDVHSRIELYEGHHTFIGCKGIKTLVCGQYAQAELINTARPTTITDDYGNVTVRQDPMSQITSGSYQNVRTRSQGMLKLKATVNAGATGTFDLGSVLNTNIASEGQTGLVRILSRRSYDTAPVIAQGVILRKPTGTTFTRIGNMPTGMTISIAGTVLSVSETRGDTKFLDIIFNPD
- Physico‐chemical
properties -
protein length: 678 AA molecular weight: 74052,48910 Da isoelectric point: 5,34312 aromaticity: 0,07670 hydropathy: -0,21814
Domains
Domains [InterPro]
DC_0044
STR
1–673
STR
1–673
Coil
Unmapped
122–149
Unmapped
122–149
1
678
Architecture
STR 1-673 |
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
678
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 240 | 240 | 0,9952 |
| Central domain | 241 | 552 | 313 | 0,9903 |
| C-terminal | 553 | 678 | 125 | 0,9687 |
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-240
1-240
Central
241-552
241-552
C-terminal
553-678
553-678
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
Acinetobacter phage vB_AbaP_EPab_B [NCBI] |
3038302 | Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes |
| Host |
Acinetobacter baumannii [NCBI] |
470 | cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Moraxellales |
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
WGV35678.1
[NCBI]
Genbank nucleotide accession
OQ730212.1
[NCBI]
CDS location
range 33542 -> 35578
strand +
strand +
CDS
ATGAATATACTACGCTCATTTACAGAGACAGTGGTGACTACACCTACAGATACTTTCCCTATCAGTTTTGAATACGATGAGAAGTATGATGCTGTACATGTCTTTCTTAATGACGTAGCAGTTGAGGATTTGGGGTACACAGTATCTCAAATCAATGCTGTTACTCTAAAAGTTGAACCTGCTATTCCAGAAGGTACGGTTCGTATTGAACGCGAAACAGATATTGATAAGATGAAATACATCTTTGATGCTGGTGCGTTATTCATTGATCAGAATGTGGATGCTGATTTTAAACAAATCGTACACTCACAACAAGAGGTCCGCGATGGTTTTATTAAACTACGTGGTGATGTACTGCCATTAGTGCACAGTTTACAAGAAGCTTTGAAACAAGCGCAAGAATCTAGTGAAGCTGCTCAAGAGGCTGCTGATGCTGCGGAAGAAGCTGCTGCGTTAGTTAGTGGTGCAGTTACATCTGTCAAAACTATTACGGACCTAAAAGCATTACCTGCGTGGGAGGGGCGTGTAGTTGTTATGCAAGGTCATACTGAATTAGGTAAGAAATCTACTATATTTAGATATGACACTACTAACACAGATACCCCCAACAACTACTCCGTAATTAAACCTAACACAGGTACAGGTAACTGGTTGGCTTTAGATACTGCGGTGTATGAAAGCTCTCAACTAGGTTGTGGTGTTGCTGTTACTAATAATGATGTATTGATTAATCCCTTACTAGCTACATCAGGTTCTATTACGATCCGCGAAGAATTACCTACTACGAACCCAATTGTTGTACAAGATTACAATGATATTCGTGGTTTAGGTACTCGTGCTGGGTTTAGATACAATGGACCTAGCGGTACTGCTGATACTTTAGAGGGGCGTCTACCAGTTGTTAAACTATTCAAGGATAATGCTCAGGCAGTCAAGCAATCTAGGTTAGAGAACTTAACCGTCCATGCAAACTACAAGCCTTATGTAACTGCTGTGGATGCTCGATACTTAACAGGTCAGTCTAAGTTACGTGAATTAATTATCCGAGGTGTTACAGATACGTCTGTAGGTTTGGTACTCAATAAGATGTGGTACGATAAAATCAGCGATGTATTTATCAGTGGTTATGATCCTAGTAAACCTGCTGGTTCTCGTTGGGGTACTGGTGTGGTTATCGAGTCTAAGTACTCGTCTGATCCTGCATCACCTGACTACGGGGCACAGATCAATGCTTTGACAGTGGATGTATCTTGTCATAGTTTAAAGGTAGGTTACTTAATTCGACCAAATAACTACATCTACGGTTTAAATATTAATACAATGCCTACTGTAGAGAACTGCGACATTGGCTTCAAGATGGAATCTGCACCCGCATCTGTAGATTATCAAGTACGGCAAAGCTGTATTTCTGCGTACTTTGAAAACAACGGTATTGATATTCAGTGGGGTACACCTAGTACCACTAAAGCACGTAACTCTAAACATGTATGGTTGAATTGTTCGTTCGATGATGTTCACTCACGTATTGAGTTGTATGAAGGTCATCATACCTTCATTGGATGTAAAGGTATTAAGACTCTAGTGTGTGGTCAATATGCTCAAGCTGAGCTTATCAACACTGCACGACCTACAACTATCACTGATGATTATGGTAACGTAACTGTACGTCAAGACCCTATGTCTCAGATTACATCTGGTTCGTATCAAAATGTACGTACACGTTCTCAAGGTATGTTGAAACTCAAGGCTACCGTCAATGCTGGTGCTACTGGTACGTTTGACTTAGGTTCTGTGTTAAATACTAATATTGCTTCTGAGGGACAGACAGGTTTAGTACGCATCCTATCCAGACGTTCTTATGATACTGCGCCTGTTATTGCACAAGGTGTTATCCTACGTAAGCCTACAGGTACTACATTCACACGTATCGGGAATATGCCTACGGGTATGACCATTAGTATAGCAGGTACGGTGTTAAGTGTATCTGAAACTAGAGGCGACACAAAGTTTTTAGATATTATTTTTAATCCAGATTAA
Genome Context
Genome Context
Tertiary structure
PDB ID
c370f64d05026692009746a5aceba0512e3935062cc614af4dba1e2746377490
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50