Protein

View in Explore
Genbank accession
QXN67846.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MAIGYRIEEYIDRHNKNEIIITSIYSDHRVLVKDIKRSGTLKYDRDELVLTYSEAGRVTNVISNIDEISQVNYHKPNEDIVDDTVSDSDRGPKGDPGVDGEEGKSAYDLAKLDGFSGTEAEWLASLKGAKGDKGDKGSTGDNGNSAYELAKLAGFSGTEAEWLVSIKGAKGDKGSTGDNGKSAYELAKLAGFSGTEAEWLASLKGAKGDNGDNGKSAYYLAVADGFNGTLTQWLASIKGAKGDKGDKGSTGDNGKSAYDLAKASGFSGTEAEWLASLKGAKGDNGFPTEAQWNELLNRVSAIDIF
Physico‐chemical
properties
protein length:305 AA
molecular weight: 32350,01800 Da
isoelectric point:4,83810
aromaticity:0,08197
hydropathy:-0,62098

Domains

Domains [InterPro]
DC_1967
ATT
17–144
DC_1967 DC_1725 DC_0108
IPR050938
Unmapped
88–285
IPR050938
DC_1725
STR
130–180
DC_1725 DC_2121
QXN67846.1
1 305
Architecture
ATT
STR
ATT
STR
ATT 17-144 | STR 145-204 | ATT 205-254 | STR 255-293 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Listeria phage LPJP1
[NCBI] 		2852115 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Listeria grayi
[NCBI] 		1641 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QXN67846.1 [NCBI]
Genbank nucleotide accession
MZ422438.1 [NCBI]
CDS location
range 63170 -> 64087
strand -
CDS
ATGGCTATAGGATATAGAATAGAAGAATACATCGATAGACATAACAAAAATGAAATAATAATCACATCAATATACTCAGATCATCGAGTACTAGTAAAAGATATTAAACGTAGTGGTACATTAAAATATGATCGTGATGAACTTGTATTAACGTATTCTGAAGCGGGAAGAGTTACTAATGTAATTAGTAATATTGATGAAATATCTCAAGTTAACTATCATAAACCTAATGAAGATATCGTAGATGATACCGTTTCCGATAGTGACCGTGGACCAAAGGGTGATCCCGGAGTTGATGGTGAAGAGGGTAAGTCTGCTTACGATCTAGCAAAATTAGATGGATTTAGTGGAACTGAAGCCGAATGGTTAGCTAGTCTTAAAGGTGCAAAAGGCGACAAAGGCGATAAAGGAAGCACTGGTGATAACGGTAATTCTGCTTACGAACTAGCAAAATTAGCCGGCTTTAGTGGAACTGAAGCCGAATGGTTAGTTAGTATTAAAGGTGCAAAAGGCGATAAAGGAAGCACTGGAGATAACGGTAAGTCTGCTTACGAACTAGCAAAATTAGCTGGATTTAGTGGAACTGAAGCTGAATGGTTAGCTAGTCTTAAAGGCGCAAAAGGTGATAATGGTGATAACGGTAAGTCTGCTTACTACTTAGCAGTTGCTGATGGATTTAACGGTACATTAACTCAATGGTTAGCTAGTATTAAAGGCGCAAAAGGTGATAAAGGCGATAAAGGAAGCACTGGTGATAACGGTAAGTCTGCTTACGACCTAGCAAAAGCATCTGGATTTAGTGGAACTGAAGCTGAATGGTTAGCTAGTCTTAAAGGTGCAAAAGGTGATAATGGATTTCCGACTGAAGCTCAGTGGAATGAATTATTAAATCGGGTAAGTGCTATTGATATTTTCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
f512873289bc96559252888b62c660d4bf716f94b53f4a8d61c714fa1bd936c2
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7048
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and engineering of a Listeria grayi bacteriophage Erickson,S., Paulson,J., Brown,M., Hahn,W., Gil,J., Barron-Montenegro,R., Moreno-Switt,A., Eisenberg,M. and Nguyen,M.M. 2021 34556683 GenBank