Protein

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Genbank accession
QHB40987.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MCDSNINETLFVDFSTTNDEFNWINGSSIPIETIGGQLILKSDSSTTEFRRGLGTLDASNNRIRLQVNLNIYRPQTSLSPDTKIVFGVFNGLNLVDQFSLVVNGMSANETISHNLDRLYKFENLSGNISLKIIVTDGFENHLLLDNLRCSNLFFCQDKVRTYFVIDNLINDVKNSMSSGIKLLEWKIDGVETLTTEFFTETTSVGQTPSNWKFAKANIDGENRVLENYNPNSFNPFVLDWGLEFDDSGSYYGGKPIGTISGSNYGQGIMNIGFEKPEILNANLISKNGAFFIDLDYTKSFKIVFEVLVNDNDDVNVYNAPRIYRKYTIEFDEYSCFSQFYYNDILKEPLVRINIGNDGFLFGLTDGVSQTNSISCSDSFVYEGQSIGTFEFLINFGSGIGNCGIDFDVVDVPVKIEIEWNGQIYTTNYVGLYSFGIQLLNLGIPNSQINTGNPSTGSGQLTFFKNLTDPQTALVKVYAPIENSNFTIAGICPSGTTEFVEFVWDDTLTSEDRTGSLSEVDVYVGTFLTPVTDVVLETAIDGIWTISAIFPDENSTYKIDVFIGVNELRLKGIDNASNVVYSNILKYTK
Physico‐chemical
properties
protein length:588 AA
molecular weight: 65562,50990 Da
isoelectric point:4,31507
aromaticity:0,12245
hydropathy:-0,09983

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Flavobacterium phage vB_FspS_tant8-1
[NCBI] 		2686278 Uroviricota > Caudoviricetes > Tantvirus >
Host Flavobacterium sp. LMO8
[NCBI] 		2654244 Bacteroidota > Flavobacteriia > Flavobacteriales > Flavobacteriaceae > Flavobacterium >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QHB40987.1 [NCBI]
Genbank nucleotide accession
MN812239.1 [NCBI]
CDS location
range 35537 -> 37303
strand +
CDS
ATGTGTGATTCAAATATAAACGAAACATTGTTCGTTGATTTTTCAACGACAAATGATGAATTCAATTGGATAAACGGATCATCGATTCCAATCGAAACAATTGGCGGTCAATTGATCTTGAAATCAGATTCGTCAACAACGGAATTCCGACGCGGTTTGGGAACATTGGACGCGTCAAACAACCGAATTCGTTTGCAAGTTAATTTGAATATTTATCGACCACAAACATCACTTTCACCGGACACAAAAATTGTGTTCGGTGTTTTTAATGGATTGAATTTGGTTGATCAATTTTCATTGGTTGTGAATGGGATGTCGGCAAACGAAACTATTTCACACAATTTAGATCGCTTGTATAAATTTGAAAATTTGTCCGGGAACATTTCTTTGAAAATTATTGTGACGGATGGATTTGAAAATCATTTGTTGTTGGACAATTTACGTTGTTCAAATTTGTTTTTTTGTCAAGATAAAGTCCGAACATATTTTGTCATCGATAATTTGATCAATGATGTGAAAAATTCAATGTCGTCGGGAATTAAATTGTTGGAATGGAAAATTGATGGCGTTGAAACTTTGACAACTGAATTTTTCACGGAAACAACATCGGTTGGTCAAACGCCTTCAAATTGGAAATTTGCAAAAGCAAACATCGACGGGGAAAATCGAGTTTTGGAAAATTACAATCCAAATTCTTTCAATCCTTTTGTTTTGGATTGGGGATTGGAATTTGATGATTCGGGTTCGTACTATGGCGGAAAACCAATCGGAACAATTTCGGGTTCAAATTATGGTCAAGGAATCATGAATATTGGATTTGAAAAACCGGAGATTTTAAATGCAAATTTGATTTCAAAAAATGGTGCTTTTTTTATTGATTTAGATTACACAAAAAGTTTTAAAATTGTTTTTGAAGTACTTGTGAATGATAATGACGATGTAAATGTTTACAATGCGCCAAGAATTTACAGAAAATACACAATTGAATTTGATGAATATAGTTGTTTTAGTCAATTTTATTACAACGATATATTGAAAGAACCTTTGGTTCGAATTAATATTGGAAATGATGGTTTTTTGTTTGGTTTGACCGATGGTGTTTCACAAACAAATTCAATTTCATGTTCGGATTCATTTGTTTATGAAGGTCAAAGCATTGGAACTTTTGAATTCTTGATTAATTTCGGAAGTGGAATTGGAAATTGCGGAATTGATTTTGATGTTGTTGATGTTCCGGTGAAAATTGAAATTGAATGGAATGGTCAAATTTATACAACAAATTATGTTGGTTTGTATTCATTTGGTATTCAATTGTTGAATTTAGGAATTCCAAATTCGCAAATCAACACGGGGAATCCTTCAACCGGTTCGGGACAATTGACATTCTTTAAAAATTTAACGGATCCGCAAACGGCATTGGTGAAAGTTTATGCACCAATTGAAAATTCAAACTTTACAATTGCGGGAATTTGCCCGTCGGGGACAACTGAATTTGTTGAATTTGTTTGGGACGACACATTGACGTCGGAAGATAGAACCGGAAGTTTGTCGGAAGTTGATGTGTATGTTGGAACATTTTTGACGCCGGTGACGGACGTTGTTTTGGAAACTGCAATTGATGGAATTTGGACAATTTCGGCGATTTTCCCGGATGAAAATTCAACATACAAAATCGACGTTTTTATTGGTGTCAATGAATTAAGATTGAAAGGAATTGACAACGCGTCAAATGTTGTTTATAGTAATATTTTAAAATACACAAAATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
ea1eb54777567191c08c2ef85aa791349263c2cba0bb5837c56441aeafe78478
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8192
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Diversity and Host Interactions Among Virulent and Temperate Baltic Sea Flavobacterium Phages Nilsson,E., Bayfield,O.W., Lundin,D., Antson,A.A. and Holmfeldt,K. 2020 — GenBank