Protein

View in Explore
Genbank accession
QBX25063.1 [GenBank]
Protein name
tail fibers protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MANFTFKGVDLIPFLNVLEIQRTVGNERSLTTDDLFDTGVELKNVSYGAKIIKVKVALASRSISPNEFVDTIEYSGINTRNLNALRERIAMLLRAKEPYKLELPDEPNRFYMALPKGDIELKGISDWYDETTIEFFIPDGLAHTEIVKEFEFVKNEQGTLEAEIINEGSEEVAVSYEIKLKKESGFVGIVSEYGAMQYGKVDEADGYTARKNVTVLSNQKGDFANWTDGTKNYENTNKIITTQMTADTSFGGRLGLLPNSFTTSGTSGAYQYGAVKEYTLSNPISQWYIWARAWFETGLMGQTGAWCLTVLDENNHLIAGMAIEKDDIVGNTANVRFLMGDGSGGSRTVKTISFTPSYWIPPNPYGSEGRTKNSNMFDLVKEKDRVQFFWYGGYYPFYDSRLANVKAKKIQFFVGQYAGRNTTDRKVTHHYLNDFTFQELHVEYWKDVPNRYPSGSTIAIDGENGQIKVNNQIRLDDEVLGTTYFKVPPGKTKVQLLISSFAEITSATATIQEVYI
Physico‐chemical
properties
protein length:516 AA
molecular weight: 58074,63270 Da
isoelectric point:5,19295
aromaticity:0,12016
hydropathy:-0,37791

Domains

Domains [InterPro]
G3DSA:2.40.30.200
ATT
1–143
G3DSA:2.40.30.200
DC_0420
STR
1–516
DC_0420
IPR008841
STR
39–136
IPR008841
IPR006520
Unmapped
61–143
IPR006520
QBX25063.1
1 516
Architecture
ATT
STR
ATT 1-143 | STR 144-516
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QBX25063.1
1 516
Domain Start End Length (AA) Confidence
N-terminal 1 202 202 0,8639
Central domain 203 401 200 0,1654
C-terminal 402 516 114 0,5382
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-202
Central
203-401
C-terminal
402-516

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage Javan226
[NCBI] 		2548055 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Streptococcus gallolyticus
[NCBI] 		315405 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBX25063.1 [NCBI]
Genbank nucleotide accession
MK448879.1 [NCBI]
CDS location
range 26916 -> 28466
strand +
CDS
ATGGCTAATTTTACATTCAAAGGTGTTGATTTAATACCTTTTTTGAATGTTTTAGAAATTCAACGAACTGTTGGAAATGAGCGCTCGTTAACAACAGACGACTTGTTCGATACAGGAGTTGAACTTAAAAATGTTTCTTATGGAGCTAAGATTATTAAAGTAAAAGTCGCTTTGGCTTCTCGCTCTATATCACCAAATGAATTTGTTGATACAATTGAGTATTCTGGAATCAACACTAGAAACTTAAACGCTTTAAGAGAACGCATCGCGATGCTTCTTCGAGCAAAAGAACCATATAAGTTAGAACTACCTGATGAACCCAATAGATTCTATATGGCTCTTCCAAAAGGAGATATTGAACTTAAAGGGATTTCTGATTGGTATGACGAAACGACCATAGAGTTCTTTATCCCCGACGGACTAGCGCATACTGAAATTGTCAAGGAATTCGAATTCGTCAAAAATGAACAAGGTACACTTGAAGCTGAAATCATCAACGAAGGAAGTGAAGAGGTCGCTGTTAGCTATGAAATCAAGCTCAAAAAAGAATCTGGGTTCGTCGGCATTGTGAGTGAATACGGCGCTATGCAGTATGGGAAAGTTGACGAAGCTGACGGTTATACCGCCCGAAAAAACGTGACCGTTTTAAGCAACCAAAAAGGCGATTTTGCCAATTGGACTGACGGCACTAAGAATTATGAGAATACAAACAAAATCATTACAACTCAAATGACCGCTGATACTTCGTTCGGCGGTCGTCTTGGTTTGTTGCCGAATTCATTTACAACAAGTGGTACGTCTGGCGCTTATCAGTATGGAGCAGTTAAGGAATACACGCTAAGCAACCCTATCTCTCAATGGTATATTTGGGCTAGAGCTTGGTTTGAAACTGGGCTAATGGGACAAACTGGCGCTTGGTGTTTAACGGTGCTAGATGAAAATAATCATTTAATAGCTGGCATGGCAATTGAGAAAGACGACATAGTTGGTAATACTGCCAACGTTCGTTTTTTAATGGGTGACGGTTCTGGTGGTAGTCGTACGGTTAAGACTATTTCATTCACACCATCGTACTGGATTCCACCTAATCCGTACGGTTCAGAGGGGCGTACTAAGAACTCGAATATGTTCGACTTGGTGAAAGAGAAAGACCGTGTGCAATTTTTCTGGTATGGTGGCTATTATCCGTTTTATGATTCACGTTTGGCAAATGTCAAAGCGAAGAAAATTCAATTCTTTGTCGGACAGTATGCAGGACGAAACACGACAGATAGAAAAGTGACACACCACTATTTAAACGACTTTACTTTTCAAGAATTACACGTCGAATATTGGAAAGACGTGCCTAATCGCTATCCAAGCGGTTCGACGATTGCTATTGACGGCGAGAACGGACAAATCAAGGTCAATAATCAAATTCGTTTAGACGACGAAGTTTTGGGAACGACTTATTTTAAAGTGCCACCCGGAAAAACCAAAGTGCAGTTATTAATATCTAGCTTTGCGGAAATTACTTCTGCCACAGCGACAATACAGGAGGTTTACATTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
e7b082d6f6f423a9ec62f5b15597b15db3e8fb845cf6fff6f0ccd1492244dd8c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8336
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Prophages and satellite prophages are widespread among Streptococcus species and may play a role in pneumococcal pathogenesis Rezaei Javan,R., Ramos-Sevillano,E., Akter,A., Brown,J. and Brueggemann,A.B. 2018-12-20 — GenBank