Protein

Genbank accession
AER29978.1 [GenBank]
Protein name
putative tail fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,81
TF
Evidence Phold
Probability 1,00
Protein sequence
MRDLRPVSAPIHVLAAPQFDPGRGRITLDVPHGLTLAEIVARALPAATEADLARARVALVTERGTQIVPRELWALARPRPGVRVVIRITPGKGALRSILSIIVSVAAVALTGFLFPGFAVGSWQWGLAVAGFTIVGQLLINALIPPVKPDSEAKTTYAISGWRNRLEPGAAVPVVLGTMRYAPPFAATPYTEIVGDQQYMRAVFCLGEGEVAIDGMRLGETSLSEYDEVETEIRYGVAGELPLSLYPRQVVEEQIGVELTRPYPRDDAGNITQVSEEYEARRRVSDGDGGWIWETYTATRMVNAPTTATPVVRTTGPDAAGASIILAWTGGLFKYDDDGKRQPHGVSIRIEQRLIEAEEWQLVTQLDIVTTKAESFFRQHSWSFPSRGRWQVRLTMLQDEATDSKISQRTTWAALQTIRPEYPLAYPRPLALVALRIKATHQISGSIDNFNCLVSRICRDWDAASGVWVRRASENPAAAYLEVLTHASNPKAVADSGLDLDLLADWAEWCAAEGLTYNAVLEDQGTTLRDVLTEIAAAGRATPRHDGIRWGVVIDRPLVNTLIVDHINPRNSWGFKWSRAYRNPPHAFVVKFKDAGNDFKETERVVRWPGYTGEITMTEQLALPGKVHAAEVWREARRRQLEVLHRPDTYEVTQDGAVRTATRGDAIALSHDVLNRVQLAARVKSVDGAAVEIDDVVSMAAGETYAVRFRFFEAEDDTVGISVVRPVRTLPGETQILTLTGSGPMPIVGDLVHVGPARVESYTQIVTRIEATQDMCAIVRTVDAAPQIDTILAATPIPAWSSRVGAEIDDNLLQPSAPRFVALTSGLAATGLANRISYAVAPGTGSVPTIEIGLDHRISGAESWSSTTIPVANGGGTIDSYTPGQSVDLRARGIGATGVAGPWSATITIVVGSADAALPAALDASSISITTLLGGALIQFATGDDTATARVQIYRSITSLLDRETDAVGAPIAVEPGQSYATTLGDTTRTDLIVGGGLEAVGSWTLDAGWTISGGVATHAAGTASTLSQTVALTSGKYYRVSYDVIAVSGSTVQARLTGSTIRSGTAVSAAGAVFDRIQAVSGGTGIGIRAEASTIATIDNIRAYLETDACLAQGTHHIWIEPQNAAGVPGPVAGPFTIIVT
Physico‐chemical
properties
protein length:1142 AA
molecular weight: 122107,71030 Da
isoelectric point:5,40547
aromaticity:0,06743
hydropathy:0,01182

Domains

Domains [InterPro]
IPR055385
306–419
IPR055385
AER29978.1
1 1142
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhodobacter phage RcapMu
[NCBI] 		1105286 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Rhodobacter capsulatus SB 1003
[NCBI] 		272942 Bacteria > Proteobacteria > Alphaproteobacteria > Rhodobacterales > Rhodobacteraceae > Rhodobacter

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AER29978.1 [NCBI]
Genbank nucleotide accession
JN190960 [NCBI]
CDS location
range 33099 -> 36527
strand +
CDS
ATGAGGGATCTGCGCCCCGTTTCCGCCCCCATCCATGTGCTGGCGGCCCCGCAGTTCGATCCCGGCCGCGGGCGGATCACGCTTGATGTGCCGCATGGGCTGACCCTGGCCGAGATCGTCGCCCGGGCGCTGCCTGCGGCCACCGAGGCTGATCTGGCCCGCGCCCGGGTGGCGCTGGTGACCGAGCGGGGCACGCAGATCGTGCCGCGCGAGCTCTGGGCGCTGGCCCGGCCGCGGCCGGGGGTGCGCGTGGTGATCCGGATCACGCCCGGCAAAGGCGCCCTCAGGTCAATCCTGTCGATCATCGTTTCGGTCGCGGCCGTCGCGCTCACCGGGTTTCTGTTCCCCGGATTTGCGGTCGGGAGCTGGCAATGGGGGTTGGCGGTCGCGGGCTTCACGATTGTCGGCCAGCTGCTGATCAACGCTCTGATCCCGCCCGTCAAACCCGACAGCGAGGCCAAGACCACCTATGCGATCAGCGGCTGGCGCAATCGGTTGGAGCCGGGCGCCGCGGTGCCGGTGGTGCTGGGCACGATGCGCTATGCCCCGCCCTTTGCCGCCACGCCCTACACCGAGATTGTCGGCGATCAGCAATATATGCGCGCGGTCTTTTGCCTTGGCGAGGGCGAGGTGGCGATCGACGGCATGCGGCTCGGCGAAACTTCGCTCTCCGAATATGACGAGGTCGAGACCGAGATCCGCTATGGCGTTGCAGGGGAACTGCCGCTCAGCCTCTATCCGCGCCAAGTGGTCGAGGAGCAGATCGGCGTCGAGCTGACCCGGCCGTATCCGAGGGACGACGCGGGCAATATCACGCAGGTATCCGAGGAATATGAGGCCCGGAGGCGGGTCTCGGACGGCGACGGCGGCTGGATTTGGGAGACCTATACCGCGACCCGGATGGTCAACGCGCCGACCACGGCCACGCCCGTCGTGCGCACCACCGGCCCGGATGCCGCGGGCGCCAGCATCATCCTCGCCTGGACCGGCGGGCTGTTCAAATACGACGACGACGGCAAGCGGCAACCGCACGGCGTCTCGATCAGGATCGAGCAGCGGTTGATCGAGGCCGAGGAATGGCAGCTGGTGACGCAGCTCGATATCGTCACCACCAAGGCCGAGTCGTTTTTCCGCCAGCACAGCTGGAGCTTTCCCAGCCGTGGTCGCTGGCAGGTCCGCCTGACGATGCTGCAGGATGAGGCCACCGACAGCAAGATTTCCCAGCGCACCACCTGGGCCGCGCTGCAGACGATCCGGCCGGAATATCCGCTGGCCTATCCGCGGCCGCTGGCGCTGGTGGCGCTGCGGATCAAGGCGACGCATCAGATCAGCGGCTCGATCGACAATTTCAACTGCCTGGTGAGCCGGATCTGCCGCGACTGGGATGCCGCCTCCGGGGTCTGGGTGCGTCGCGCCTCGGAAAACCCGGCCGCCGCCTATCTGGAGGTGCTGACTCACGCGTCCAACCCCAAGGCGGTGGCCGATTCCGGCCTCGATCTCGACCTGCTCGCCGACTGGGCAGAATGGTGCGCGGCCGAGGGGCTGACCTATAACGCGGTGCTGGAGGATCAGGGCACCACCCTGCGCGATGTGCTGACCGAGATCGCGGCCGCGGGCCGGGCGACGCCGCGCCATGACGGCATCCGCTGGGGCGTCGTCATCGATCGGCCGCTCGTCAACACGCTGATCGTCGATCACATCAACCCGCGCAATTCGTGGGGGTTCAAGTGGAGCCGCGCCTATCGCAATCCGCCGCATGCCTTCGTGGTCAAGTTCAAGGACGCGGGCAACGACTTCAAGGAGACCGAGCGCGTCGTCCGCTGGCCCGGCTACACGGGAGAGATCACCATGACCGAGCAGTTGGCTCTGCCCGGCAAGGTGCATGCGGCCGAGGTCTGGCGCGAGGCGCGGCGGCGCCAGCTGGAGGTGCTCCATCGCCCCGACACCTACGAGGTCACCCAGGACGGCGCCGTGCGCACCGCCACTCGGGGCGACGCCATCGCGCTCAGCCATGACGTGCTCAACCGCGTGCAGCTTGCCGCCCGGGTCAAGTCGGTGGATGGCGCGGCGGTCGAGATCGATGACGTCGTCTCGATGGCCGCGGGCGAGACCTATGCCGTGCGGTTCCGCTTCTTTGAGGCCGAGGATGACACGGTGGGCATCTCGGTCGTGCGACCCGTCAGGACCCTGCCGGGCGAGACGCAGATCCTGACGCTGACCGGCTCCGGTCCGATGCCGATCGTCGGTGATCTCGTGCACGTCGGCCCGGCCCGCGTCGAGAGCTACACCCAGATCGTGACGCGGATCGAGGCGACGCAGGACATGTGCGCGATCGTGCGCACCGTCGATGCCGCGCCGCAGATCGACACGATCCTGGCGGCCACGCCGATCCCCGCCTGGTCGAGCCGCGTCGGGGCCGAGATCGACGACAACCTGCTGCAGCCCTCGGCCCCGCGGTTTGTGGCGCTGACCTCGGGCCTCGCCGCGACGGGTCTGGCCAACAGGATCAGCTATGCGGTCGCCCCCGGCACCGGGTCGGTGCCGACGATCGAGATCGGTCTGGATCACCGGATATCCGGCGCCGAGAGCTGGAGCAGCACCACGATCCCGGTGGCCAATGGCGGCGGCACGATCGACAGCTACACGCCCGGGCAGTCGGTCGATCTGCGTGCCCGCGGCATCGGGGCGACGGGCGTCGCGGGGCCATGGTCTGCGACGATCACGATCGTGGTCGGGTCGGCCGACGCGGCCTTGCCCGCCGCGCTCGATGCGTCCTCGATCTCGATCACGACGCTGCTGGGCGGGGCGCTGATCCAGTTCGCCACCGGCGATGACACGGCGACGGCACGGGTGCAGATCTACCGCTCGATCACCAGTCTGCTGGACCGCGAGACCGATGCCGTGGGGGCGCCGATCGCGGTCGAGCCCGGGCAGTCCTATGCGACGACGCTCGGCGACACGACCCGCACCGACCTGATCGTGGGCGGCGGGCTGGAGGCGGTGGGCTCCTGGACATTGGACGCCGGGTGGACGATCTCTGGCGGGGTTGCGACGCACGCTGCGGGCACGGCCAGCACGCTCTCTCAGACTGTCGCGCTGACGTCCGGCAAGTATTACCGAGTGAGCTATGATGTCATCGCGGTCTCCGGATCGACTGTGCAAGCGCGGTTGACCGGCAGCACGATCCGCTCGGGTACGGCGGTCTCAGCCGCAGGCGCTGTGTTCGATCGCATCCAGGCGGTCAGCGGTGGCACCGGCATCGGCATCCGGGCCGAGGCGAGCACGATCGCCACGATCGACAACATCCGCGCCTATCTCGAAACCGATGCCTGTCTGGCTCAAGGCACACATCACATCTGGATCGAGCCGCAGAACGCCGCAGGCGTTCCCGGCCCGGTTGCAGGCCCCTTCACCATCATCGTAACCTGA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
e89d975e7c79f6a872167c98d3b107f36a54aac2d373f958b4d6d6178ae43a3d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8476
Evidence 0,8476
Download PDB

Literature

Title Authors Date PMID Source
Characterization of a newly discovered Mu-like bacteriophage, RcapMu, in Rhodobacter capsulatus strain SB1003 Fogg,P.C., Hynes,A.P., Digby,E., Lang,A.S. and Beatty,J.T. 2011 22018635 GenBank