Protein

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Genbank accession
YP_009285938.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MTVIRRDTAPADERVAAATAADDRAFRDVVNAERTRRLTLGVDVDIPGYGWVALEGREQDQRGILGLRIEAETRVGDADQTPFPFMDREDVAHSLTPAQMVALARLGQAWVQLVFAASWAIKAADPRPADPTDDALWPPNARRPV
Physico‐chemical
properties
protein length:145 AA
molecular weight: 15942,73840 Da
isoelectric point:4,86970
aromaticity:0,06207
hydropathy:-0,33586

Domains

Domains [InterPro]
DC_2197
STR
7–127
DC_2197
IPR025484
STR
27–124
IPR025484
YP_009285938.1
1 145
Architecture
STR
STR 7-127 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhodovulum phage vB_RhkS_P1
[NCBI] 		1873452 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Rhodovulum sp. P5
[NCBI] 		1564506 Pseudomonadota > Alphaproteobacteria > Rhodobacterales > Paracoccaceae > Rhodovulum >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009285938.1 [NCBI]
Genbank nucleotide accession
NC_031059.1 [NCBI]
CDS location
range 34345 -> 34782
strand +
CDS
GTGACCGTGATCCGCCGCGATACCGCCCCGGCTGATGAACGTGTCGCCGCCGCGACGGCAGCCGACGATCGCGCTTTCCGCGACGTGGTGAATGCCGAACGGACACGGCGCCTTACGCTCGGCGTGGATGTCGACATCCCCGGCTATGGCTGGGTCGCTCTGGAGGGCCGTGAGCAGGACCAACGCGGCATTCTCGGCTTGCGGATCGAGGCAGAGACCCGCGTGGGGGATGCCGACCAGACCCCGTTTCCATTCATGGATCGCGAGGATGTCGCCCACAGCCTGACGCCCGCGCAAATGGTCGCGCTGGCGCGTCTCGGGCAGGCCTGGGTGCAGCTCGTCTTTGCCGCCAGTTGGGCGATCAAGGCGGCCGACCCACGGCCCGCCGACCCGACAGACGACGCCCTTTGGCCACCCAATGCAAGGCGCCCGGTATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
307550ae00158c0e5a08b36ab304ccaea88ed7be1b43f9f550b95c1dd5ff7803
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8701
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome sequence of a marine inducible prophage vB_RhkS_P1 induced from Rhodovulum sp. JLT5 in shallow-sea hydrothermal systems Lin,D. 2016-12 — GenBank