Protein

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Genbank accession
XTB81317.1 [GenBank]
Protein name
YadA-like protein
RBP type
TF
Evidence RBPdetect
Probability 0,83
Protein sequence
MKAFALSAILVLSAISAPSFAHSDKCSHSKQCEVQQGPKGDKGEQGIQGEQGPKGDKGDRGEQGLKGDTGSAGINGTNGIDGKDGIDGKDGIDGKDGINGKDGIDGKDGAQGEKGDSGADGKKGETGLTGAAGLNGVDGLNGKNGKDADMSAVNANAKSIKALEQSTNKRFASLQKQVDRNRDHASAGISGVAAMANIPQVSQGSAFSVGAGVGAYDGESALAIGVSARFNENVVTKASVAMTSESDAVLGAGVSYEW
Physico‐chemical
properties
protein length:258 AA
molecular weight: 25698,79190 Da
isoelectric point:5,16845
aromaticity:0,03101
hydropathy:-0,53140

Domains

Domains [InterPro]
DC_1266
STR
16–100
DC_1266 G3DSA:3.30.1300.30
IPR008160
STR
36–91
IPR008160 G3DSA:3.30.1300.30
IPR050149
Unmapped
36–146
IPR050149 IPR045584
DC_2298
STR
81–185
DC_2298 IPR005594
XTB81317.1
1 258
Architecture
STR
RBD
ATT
STR 16-185 | RBD 186-198 | ATT 199-258
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage EcM-vB1
[NCBI] 		3418805 Viruses >
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XTB81317.1 [NCBI]
Genbank nucleotide accession
PV574017 [NCBI]
CDS location
range 6385 -> 7161
strand +
CDS
ATGAAAGCATTTGCATTGTCAGCTATTCTAGTTTTATCTGCCATTAGTGCCCCATCCTTTGCTCATTCTGACAAATGCTCACACTCTAAACAGTGTGAAGTCCAGCAGGGGCCGAAAGGTGATAAAGGAGAACAGGGTATTCAAGGCGAACAAGGTCCGAAAGGTGACAAGGGTGATCGCGGAGAGCAGGGCTTAAAAGGTGATACTGGATCGGCTGGCATCAATGGTACTAATGGCATTGATGGTAAAGATGGCATTGATGGTAAAGATGGCATTGATGGTAAAGATGGCATCAATGGTAAAGATGGCATTGATGGTAAAGATGGCGCTCAAGGTGAAAAAGGTGATTCTGGTGCAGATGGTAAGAAAGGCGAAACTGGCCTAACTGGTGCAGCAGGTTTGAATGGCGTTGACGGATTAAATGGCAAAAATGGTAAAGATGCAGATATGTCTGCCGTTAATGCTAACGCCAAATCTATCAAAGCTCTGGAACAATCCACCAACAAACGTTTTGCTTCTTTGCAAAAACAAGTAGACCGTAACCGTGATCATGCCTCTGCTGGTATTTCTGGCGTGGCTGCAATGGCTAACATCCCGCAAGTAAGTCAAGGATCTGCTTTCTCTGTTGGTGCTGGGGTAGGTGCTTACGATGGTGAATCTGCTCTTGCTATTGGTGTTAGTGCTCGTTTCAATGAAAACGTAGTAACTAAAGCATCAGTGGCAATGACTTCAGAGAGTGACGCTGTTCTGGGCGCTGGTGTAAGTTACGAGTGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
dea65eb62194120e9099b15b81c117daace2a556af06274cd80dc43b8350645b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7394
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of EcM-vB1 bacteriophage targeting multidrug-resistant Escherichia coli Abozahra,R., Shlkamy,D. and Abdelhamid,S.M. 2025 39754154 GenBank