Protein

View in Explore
Genbank accession
QAY18181.1 [GenBank]
Protein name
WD40-like beta-propeller protein
RBP type
TSP
Evidence RBPdetect
Probability 0,87
Protein sequence
MIRPLEFALWPFTKVPKPNIPALALTLGPDAVGGGLPFTKVYALARESDGVYLYKDEERTHGWTLPSNLNTAYNDRLTLAFDKDGLWVAIQNGSVGGSREEPQGISVFKNGELIYSLQGYDPQLVYTALAFQEEEGISLECLASLSSVLLFYMDLDSKTLKVRNGNSDTVLKVFDYPHRLVKAVPVRYGIQLWLVDEAGEWVGALADLTIIQPRLKGEVDGPEVWNNPQDGSWVKVFGRKWLWRVDKNANAFVFTSGNESYSVSVPHSLAEVCFASAAFDHVGYPTVAYQLSSGTYVTYWDILSRQYVTTPWIPVRFPLLFQQAVIPAYRYTPGADIFLLGVNGGVLEVRNQAGNYASVVFSVDVGNGVVPTEIKLRPLKYQVETNRGIKYTSGLYPYFTIGYLAANEASFRIVPDQFFKVEITDADISFYDIVKPYSASVSISAGLNDAFIAIYDIVKAYQAYPSILAQLNDAEVSLRTVTQLYNASASLSINLVDASTELKQVAFAYPMSASMSVSLSDADVVLS
Physico‐chemical
properties
protein length:527 AA
molecular weight: 58195,36700 Da
isoelectric point:4,88562
aromaticity:0,12524
hydropathy:0,06376

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QAY18181.1
1 527
Domain Start End Length (AA) Confidence
N-terminal 1 526 526 0,9964
Central domain 527 526 1 0,4553
C-terminal 527 527 0 0,0000
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-526
Central
527-526
C-terminal
527-527

Taxonomy

  Name Taxonomy ID Lineage
Phage Thermus phage TSP4
[NCBI] 		1298530 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Thermus sp. TC4
[NCBI] 		676248 Deinococcota > Deinococci > Thermales > Thermaceae > Thermus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QAY18181.1 [NCBI]
Genbank nucleotide accession
MH992131 [NCBI]
CDS location
range 75804 -> 77387
strand +
CDS
ATGATACGCCCGCTAGAGTTTGCCTTATGGCCGTTTACTAAGGTGCCTAAGCCCAACATTCCGGCCCTGGCCTTAACGCTGGGGCCGGATGCTGTTGGCGGAGGCTTGCCCTTTACAAAGGTGTACGCCTTAGCCAGGGAAAGCGACGGGGTTTACCTGTATAAGGACGAGGAAAGGACTCATGGATGGACACTACCTTCAAACCTTAACACCGCATATAACGACCGCTTAACCCTAGCTTTTGATAAAGATGGGCTATGGGTAGCCATCCAAAACGGAAGTGTTGGCGGGAGCAGGGAGGAGCCACAAGGAATATCCGTGTTTAAGAACGGCGAACTGATTTACTCCCTGCAAGGCTATGACCCTCAGTTGGTCTATACCGCCTTAGCCTTTCAAGAAGAGGAAGGCATATCACTGGAGTGCTTAGCCTCTTTGTCCAGCGTGCTGTTGTTTTACATGGACTTAGACAGTAAGACGCTGAAGGTTAGGAATGGAAATAGTGATACGGTTCTGAAGGTATTTGACTACCCTCATCGCCTGGTTAAAGCAGTACCTGTACGTTACGGAATACAGCTTTGGTTGGTTGATGAGGCAGGAGAATGGGTAGGCGCTCTAGCCGACCTGACGATTATCCAACCTAGGCTTAAAGGCGAGGTGGATGGTCCAGAGGTATGGAATAACCCGCAAGACGGTAGCTGGGTAAAGGTGTTCGGTAGAAAGTGGCTTTGGCGGGTAGATAAAAATGCCAATGCTTTCGTCTTTACCAGCGGAAATGAGTCCTACAGCGTCAGCGTGCCCCATAGCTTGGCTGAGGTGTGCTTTGCTTCCGCTGCCTTTGACCATGTAGGGTATCCGACCGTAGCCTACCAACTTAGCAGCGGTACCTATGTCACCTATTGGGACATACTTAGCAGGCAATACGTGACCACGCCTTGGATACCTGTAAGGTTTCCCCTACTCTTTCAGCAGGCTGTTATTCCTGCCTACAGGTACACACCTGGCGCCGACATTTTCCTTTTGGGCGTGAACGGCGGGGTACTGGAGGTAAGAAACCAAGCAGGAAACTACGCTAGCGTGGTGTTTAGCGTTGACGTTGGAAACGGGGTAGTTCCCACAGAAATCAAGTTAAGGCCTCTGAAATACCAGGTAGAAACCAACCGAGGGATCAAATACACTTCGGGGCTATACCCTTACTTCACTATCGGGTACTTAGCGGCAAACGAAGCCAGCTTCCGTATTGTGCCGGACCAGTTTTTTAAGGTTGAAATTACGGATGCGGACATTAGCTTTTACGACATTGTTAAGCCGTACAGCGCCAGTGTGTCTATAAGCGCAGGTTTGAATGACGCTTTTATTGCTATTTATGACATAGTCAAAGCCTATCAAGCCTATCCTTCAATACTGGCGCAGCTTAATGACGCAGAAGTGTCTTTAAGAACAGTAACTCAACTGTATAACGCCAGCGCAAGTTTATCGATTAACTTAGTTGACGCTAGTACAGAGCTAAAACAGGTAGCTTTTGCATATCCAATGAGCGCCAGCATGAGCGTAAGTTTGTCAGATGCTGACGTAGTTTTGAGCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
9e8638e27e904aece6534f8f6e2ca6ad89f136000d621dd91c6ac976b6e29ade
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5209
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The complete genome of Thermus sp. Phage TSP4 Lin,L.-B., Wang,F., Xiong,Y. and Zhang,Q.-L. 2022-04-08 — GenBank