Protein

View in Explore
Genbank accession
QGJ84691.1 [GenBank]
Protein name
baseplate/receptor binding protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MTKHFITLSTTEPNNYVGLLKMRQGDINTQTIQATITANGQLFNFDHLAVFFNAVLPNGNVIRDKVTEVDYINSKLNYVVANSFLQEVAQVTAWFSFENGDKIIDSTKNFQYSVIGGWKECIPQGNYIYELSEIQREIEEIIGNKDFSSLINKIDLLKTDFDYLDDTKASKQDLASAITSQDDKIANIVNGTPKGVYASLDALKSAFPNGTAGIYVTSDNGHWYYWNNGWIDGGIYQSTAIQDDSLSYKKLKAGGRKGCIGANKLVIDFKNKKISVTSDAFVLDGITYFKIVSGAEFTIARNNGYLVYNKVSKVLDLVDIGGAFNSSLDENIYLGVVWVGEMVSVDNPLITNVLHTNGKTEVYKNNILKEPYETGVLINDFDFVNVFQVDYTNKVLKLKQENATLPWYVQSDKSPVRYPISQTEVKVLTTGTPQVLYYDYNDATLKFAGHKDYLDISDNTIYLGRIAFNLKKHYLNILTNNGSLDNLIKGYEAFSYDGIVVNAYNRIKPIIDFDNKLITFPRLGTDNGWNWIIYRQNNYASFQLVNSFKNEKGDVVVPLLDTAFQFLVLDQENLKIKCISNLDAVAGNYNYIKLGVIMLYSKTSFLNFELDNTELFNIIDDSESNQSKNFEKNNIIIFGDSLSTFTNAPENTSNYPALYPKGDVTDINKTWWKPIFDKYGNRCFNAAFSGGCLTNVIADRKTGLQILDETTLSVSPDILLFEYGTNDYGRGVSSSTFNTDLETFVSKARKKWPAVIIYVLSYPFNERMYKDLNLNQETVEDWTNAVISKAKTLDCKTVNITHVGNSKSNWNLFNIGDGIHFNVKGAKLIKNNVIQQVAEFN
Physico‐chemical
properties
protein length:841 AA
molecular weight: 94796,74240 Da
isoelectric point:5,29691
aromaticity:0,12247
hydropathy:-0,24828

Domains

Domains [InterPro]
G3DSA:2.60.40.3350
ATT
1–117
G3DSA:2.60.40.3350 DC_1932 IPR051532
G3DSA:2.60.40.3350
ATT
1–120
G3DSA:2.60.40.3350 SSF52266
IPR018913
ATT
3–140
IPR018913 IPR036514
SSF52266
STR
634–837
SSF52266
cd00229
ENZ
635–836
cd00229
IPR013830
ENZ
638–827
IPR013830
QGJ84691.1
1 841
Architecture
ATT
STR
STR
ATT 1-140 | STR 141-520 | STR 630-839 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QGJ84691.1
1 841
Domain Start End Length (AA) Confidence
N-terminal 1 628 628 0,9809
Central domain 629 827 200 0,5443
C-terminal 828 841 13 0,4939
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-628
Central
629-827
C-terminal
828-841

Taxonomy

  Name Taxonomy ID Lineage
Phage Lactococcus phage proPhi6
[NCBI] 		2656513 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Lactococcus lactis subsp. cremoris TIFN6
[NCBI] 		1234876 Bacillota > Bacilli > Lactobacillales > Streptococcaceae > Lactococcus > Lactococcus cremoris

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QGJ84691.1 [NCBI]
Genbank nucleotide accession
MN534319 [NCBI]
CDS location
range 32225 -> 34750
strand +
CDS
ATGACAAAACATTTTATAACACTGTCCACCACAGAGCCAAATAATTATGTTGGTCTCCTTAAAATGAGACAAGGAGATATTAACACTCAAACTATTCAAGCAACAATCACAGCAAACGGTCAACTCTTTAACTTTGACCACTTGGCTGTGTTTTTTAATGCTGTTTTACCCAACGGAAATGTTATCAGAGACAAAGTTACTGAAGTAGATTATATAAATTCTAAACTTAATTACGTCGTTGCGAACAGTTTTTTGCAAGAAGTTGCTCAAGTCACAGCTTGGTTTTCATTTGAAAATGGCGATAAAATAATTGATAGCACAAAGAACTTTCAATACTCCGTCATTGGAGGATGGAAGGAGTGCATCCCGCAAGGTAATTATATTTATGAGCTTTCAGAAATTCAACGTGAAATTGAAGAAATTATTGGCAATAAGGACTTCAGCAGTCTGATAAACAAAATTGATTTGCTCAAAACAGACTTCGATTACCTTGATGACACAAAAGCAAGTAAACAAGATCTGGCTTCGGCAATAACTAGCCAAGATGACAAAATTGCCAATATCGTAAATGGAACACCAAAAGGAGTGTACGCCTCTTTAGATGCTTTGAAATCGGCATTCCCAAATGGGACGGCTGGAATATACGTTACTAGCGACAACGGTCACTGGTACTATTGGAATAACGGATGGATTGACGGAGGAATCTATCAATCTACAGCTATCCAAGATGATTCACTCAGTTATAAAAAGCTGAAAGCTGGCGGAAGGAAAGGGTGCATCGGTGCAAATAAATTAGTTATTGATTTTAAGAATAAAAAAATAAGCGTAACATCTGATGCATTTGTTCTTGATGGAATTACATATTTTAAAATTGTTTCAGGGGCTGAATTTACAATTGCTAGAAACAATGGATACTTGGTTTATAACAAAGTGTCTAAAGTTCTTGATTTAGTAGACATTGGGGGAGCTTTTAACAGCTCGTTAGATGAAAATATCTACCTCGGTGTAGTTTGGGTGGGTGAGATGGTGTCGGTAGATAATCCATTAATTACCAACGTTCTTCACACCAACGGTAAAACAGAAGTTTATAAAAATAATATTTTAAAAGAGCCTTATGAAACTGGAGTGTTAATAAATGACTTCGATTTTGTGAATGTGTTTCAAGTCGACTATACTAATAAAGTTCTCAAGTTAAAACAAGAAAATGCTACTTTGCCTTGGTATGTTCAGTCTGATAAATCTCCTGTTAGATACCCTATTAGTCAGACCGAAGTAAAGGTTTTGACGACCGGAACGCCCCAAGTGCTTTATTACGATTATAACGATGCGACTCTCAAATTTGCCGGTCATAAAGATTACTTAGACATTTCAGATAATACAATCTATCTTGGGCGAATCGCTTTTAATTTGAAAAAACATTACTTGAATATTTTGACAAATAATGGCTCGCTAGATAATCTCATTAAAGGTTATGAAGCGTTCTCTTATGATGGAATTGTCGTCAATGCGTATAATCGGATTAAGCCAATTATTGATTTTGATAATAAATTAATCACATTCCCAAGACTGGGCACGGACAACGGTTGGAACTGGATTATTTATAGACAAAATAATTATGCTAGTTTCCAACTTGTTAATTCTTTCAAAAACGAAAAAGGTGATGTTGTTGTTCCACTTTTGGACACAGCTTTTCAATTTCTAGTTTTAGATCAAGAAAATCTTAAAATTAAATGTATCTCAAATTTAGATGCAGTCGCAGGAAATTATAATTACATCAAATTAGGGGTGATTATGCTTTATTCGAAGACATCATTTCTTAATTTTGAGCTTGATAATACCGAACTATTCAATATCATTGATGATAGCGAAAGTAATCAATCTAAAAATTTTGAAAAAAATAATATCATTATTTTTGGAGATAGTCTATCTACATTCACAAATGCTCCAGAGAATACCTCTAATTATCCAGCTCTTTATCCGAAGGGAGATGTAACCGACATAAACAAGACTTGGTGGAAACCTATTTTTGATAAGTATGGGAATCGATGCTTTAATGCTGCTTTTTCAGGAGGTTGTTTAACTAATGTAATTGCAGATAGAAAAACAGGACTTCAGATATTAGACGAAACGACATTATCAGTAAGTCCAGATATATTATTATTTGAATATGGAACCAATGATTATGGAAGAGGAGTATCTAGTTCCACTTTTAATACTGATTTAGAAACTTTTGTATCTAAAGCCCGAAAAAAATGGCCAGCGGTCATAATTTATGTCCTTAGCTATCCGTTTAACGAGCGCATGTACAAAGATTTAAATCTTAATCAAGAAACTGTCGAAGATTGGACGAATGCGGTGATTTCTAAAGCGAAAACACTTGATTGTAAAACTGTCAACATTACTCACGTCGGTAATTCGAAGAGCAATTGGAATCTATTTAATATCGGTGATGGAATTCACTTCAATGTTAAAGGTGCGAAGTTAATAAAGAATAATGTGATTCAACAAGTTGCAGAATTCAATTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
191f7d2f104e592b339fe464cda06133c552a78311c55270aa55e45dd5a28672
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2833
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomics of tailless bacteriophages in a complex lactic acid bacteria starter culture Alexeeva,S., Liu,Y., Zhu,J., Kaczorovska,J., Kouwen,T.R.H.M., Abee,T. and Smid,E.J. 2021 — GenBank