Protein

Genbank accession
AFB83926.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MKMTVTKALTEIKKLDKQIAKLVQSGQFILTATRGHVPGFTTTEDASKAVKANMDKVRALMKRRALIKAKVTASNAATKVTIGGVEMTVAEAIERKASIEMDETLLQVLKQQFNQVTNKQVRHEQMVQSQIDSKVEQVFGNVKKIDANDGTYKAIKEQVEQANKFDIVDPNKLADEIEKLEESIDDFKANVDVELSVANATTEIEVE
Physico‐chemical
properties
protein length:207 AA
molecular weight: 22978,10820 Da
isoelectric point:6,22906
aromaticity:0,03382
hydropathy:-0,39517

Domains

Domains [InterPro]
Coil
5–25
Coil
AFB83926.1
1 207
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage pVp-1
[NCBI] 		1150989 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio parahaemolyticus
[NCBI] 		670 Bacteria > Proteobacteria > Gammaproteobacteria > Vibrionales > Vibrionaceae > Vibrio

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AFB83926.1 [NCBI]
Genbank nucleotide accession
JQ340389 [NCBI]
CDS location
range 45662 -> 46285
strand +
CDS
ATGAAAATGACAGTAACTAAAGCTCTTACTGAAATCAAAAAACTTGACAAACAAATCGCTAAGCTAGTTCAAAGCGGTCAGTTTATCCTAACAGCAACCCGTGGACATGTCCCAGGCTTCACAACTACTGAAGATGCTAGCAAAGCTGTTAAAGCTAACATGGATAAAGTACGCGCTCTTATGAAACGTCGTGCTCTTATCAAAGCTAAAGTTACTGCGTCTAACGCTGCAACTAAAGTTACAATCGGCGGAGTCGAAATGACTGTTGCAGAAGCAATTGAGCGTAAAGCCTCAATTGAGATGGACGAGACACTTCTTCAAGTCCTAAAACAACAGTTTAATCAAGTTACTAACAAACAAGTACGCCATGAGCAAATGGTTCAATCTCAGATTGATTCTAAAGTCGAACAAGTATTCGGTAACGTGAAGAAAATCGACGCTAATGATGGTACTTACAAGGCTATCAAAGAACAGGTTGAACAAGCCAACAAGTTCGATATTGTTGACCCTAATAAACTTGCTGATGAAATCGAGAAGCTTGAAGAGTCTATCGACGACTTCAAAGCTAACGTTGACGTAGAGCTATCCGTAGCTAACGCGACTACTGAAATCGAAGTAGAATAA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
d20cd60465fcde09609296bd6ca5da935b335051c1a832b0c923fc27769e5716
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9742
Evidence 0,9742
Download PDB

Literature

Title Authors Date PMID Source
Complete Genome Sequence of a Novel Marine Siphovirus, pVp-1, Infecting Vibrio parahaemolyticus Kim,J.H., Jun,J.W., Choresca,C.H., Shin,S.P., Han,J.E. and Park,S.C. 2012 22628398 GenBank