Protein

View in Explore
Genbank accession
XCO37390.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MDQDIKTVIQYPVGATEFDIPFDYLSRKFVRVSLVADDNRRLLSNITEYRYVSKTRVKLLVETTGFDRVEIRRFTSASERVVDFSDGSVLRAADLNVSQLQSAHIAEEARDSALLAMPQDDAGNLDARNRRIVRLAPGVEGTDAINKDQLDTTLGEAGGYLADMKELDKIIRDFVENFANDPASIRGVVWMYNAGAAIGGETSVVINKPGDVLAVPCIYINGSRNDVGVTYEYDNRTKTITFKGDRKLKQDDLLIAITAEGSVPLADILMSLDGAKYVMTSQGVSVEAAISGLRGNVKSLLDLHLPADGDDYSPAANRALAQGNALYIPVGRWTFKSTVQIPAGATIFGSGDKSIVASPEAVDAAGNGLVTVLRADNVGGITLKDFKVDGGSGSIHTVKKNVRGVRFYKCNNIRLDGVEVSRTADWATSFEQCSEVYVNGYKHRRSESPLHGGRDGLHFLDCKGFMATNLDIESHDDCVGITSETLGTFDGHVNGVRGTSTLGSLVIYNEETAGGVYIQMPMRGLRIDNVFPKEGQTARQLVRVAAYAATSDARDVIISNVQGNVTASHGVQVQNVKNVFLDNVDAHVVSSSSHGVYIINCDGVRGNVSGTTSASTHDGVQVYNSKNVELDITSRASAGNAAQINGCTNVRVVPLLASAGAAGLRITGSTNVDVPSGTFSGTFPGLCINQTGNTNLFIAATILYDTTSGRINNPVASMFMDIPAVIISAKEAADGTLTVYRAIGGTITKVATGRYQITFTNPMQTAQFTFTMTAAHPGSVRQAYTASAIGVDGLTLGVKDSAGTDTYSEYIRFIAYNY
Physico‐chemical
properties
protein length:818 AA
molecular weight: 87482,19360 Da
isoelectric point:5,57627
aromaticity:0,07090
hydropathy:-0,09914

Domains

Domains [InterPro]
DC_0778
STR
1–448
DC_0778 IPR011050
IPR005604
ATT
3–127
IPR005604 IPR012334
IPR011050
STR
315–518
IPR011050 DC_0499
PTHR31375
Unmapped
315–560
PTHR31375
IPR000743
ENZ
397–517
IPR000743
XCO37390.1
1 818
Architecture
ATT
STR
ATT 1-127 | STR 128-818
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XCO37390.1
1 818
Domain Start End Length (AA) Confidence
N-terminal 1 311 311 0,9958
Central domain 312 718 408 0,9932
C-terminal 719 818 99 0,9892
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-311
Central
312-718
C-terminal
719-818

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage phi1_146006
[NCBI] 		3232191 Viruses >
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XCO37390.1 [NCBI]
Genbank nucleotide accession
PP889461.1 [NCBI]
CDS location
range 35517 -> 37973
strand +
CDS
ATGGACCAAGACATTAAAACAGTCATTCAGTACCCAGTAGGGGCCACTGAGTTCGACATCCCGTTCGACTACCTGTCCCGTAAGTTTGTCCGTGTGTCGCTGGTAGCTGACGACAACCGCAGACTGCTGAGTAACATCACTGAGTACCGCTACGTGTCTAAGACCAGAGTGAAGCTCCTTGTGGAAACTACAGGGTTCGACCGTGTGGAAATCCGCAGGTTCACATCGGCTTCAGAGCGCGTGGTCGACTTCAGTGACGGCTCGGTTCTCCGTGCAGCCGACCTTAACGTTTCTCAGCTTCAGTCTGCCCATATTGCAGAAGAGGCCAGAGATTCAGCACTACTGGCTATGCCACAAGATGATGCTGGCAACCTTGATGCTCGTAACCGTCGCATAGTTCGGCTGGCTCCGGGTGTTGAAGGTACTGACGCAATCAACAAGGACCAGCTTGACACCACGTTAGGTGAGGCTGGTGGCTATCTTGCGGACATGAAGGAACTTGACAAAATCATTCGCGACTTCGTTGAGAACTTTGCGAACGACCCAGCGTCCATCCGTGGAGTCGTCTGGATGTACAACGCAGGGGCAGCTATTGGTGGAGAGACGTCTGTGGTAATCAACAAGCCGGGTGACGTGTTGGCTGTACCGTGCATCTATATCAACGGGTCTCGTAATGACGTTGGGGTAACTTACGAGTACGACAACCGTACCAAGACGATTACCTTTAAGGGTGACCGTAAGTTAAAGCAGGATGACCTCCTTATTGCCATCACGGCGGAAGGCTCTGTACCGCTTGCGGATATCCTTATGAGCCTTGACGGTGCCAAGTACGTTATGACCTCTCAAGGTGTAAGCGTCGAGGCTGCTATCAGTGGTCTGAGAGGTAACGTTAAGTCCCTACTCGACCTGCACCTTCCGGCAGATGGTGACGACTATTCCCCTGCTGCCAACAGAGCGCTGGCTCAAGGGAACGCTTTGTATATCCCCGTAGGTCGCTGGACCTTTAAGTCTACCGTCCAGATTCCTGCTGGTGCCACAATCTTTGGGTCAGGTGATAAGTCTATCGTGGCGTCACCTGAGGCTGTGGACGCTGCTGGTAACGGTCTGGTTACTGTTCTCCGTGCCGACAACGTTGGTGGAATCACCTTGAAGGACTTTAAGGTAGACGGCGGCTCTGGTAGCATCCACACGGTCAAGAAGAACGTTCGAGGTGTTCGCTTCTACAAGTGCAACAACATCCGACTCGATGGCGTAGAGGTATCCCGCACAGCAGACTGGGCGACTTCATTCGAGCAGTGCTCTGAGGTATACGTGAATGGCTACAAGCATCGACGTTCGGAAAGCCCACTTCACGGAGGACGAGACGGTCTTCACTTCCTCGACTGCAAGGGATTCATGGCTACCAATCTGGACATTGAGTCACACGACGACTGCGTAGGGATTACCTCGGAGACCCTTGGTACGTTTGATGGTCATGTTAATGGGGTTCGCGGCACGTCGACACTCGGTTCTCTCGTGATTTATAACGAAGAGACCGCTGGCGGAGTGTACATCCAGATGCCTATGCGTGGCCTTCGTATTGACAACGTGTTCCCTAAAGAGGGTCAGACTGCTCGCCAGCTTGTTCGTGTTGCGGCGTATGCAGCTACCTCTGATGCTCGTGATGTAATCATCTCGAACGTTCAGGGTAACGTAACGGCGTCTCACGGTGTTCAGGTGCAGAACGTTAAGAACGTGTTCTTGGACAACGTAGACGCACATGTGGTGTCCTCAAGTTCACACGGTGTGTATATCATCAACTGTGATGGTGTTCGTGGTAACGTCAGCGGGACCACCTCAGCGTCTACACACGACGGTGTTCAGGTGTATAACTCAAAGAACGTAGAGCTGGACATTACGTCTCGCGCCAGTGCGGGTAACGCTGCGCAAATCAACGGGTGCACTAACGTACGTGTAGTTCCTCTACTGGCTTCTGCTGGTGCTGCTGGCCTGCGAATCACTGGGTCAACCAATGTGGACGTTCCGTCTGGTACCTTCAGTGGGACATTCCCCGGACTCTGCATCAACCAAACTGGTAACACCAACTTGTTCATTGCGGCGACAATCCTGTACGACACTACGTCTGGGCGAATCAATAACCCAGTGGCCTCCATGTTCATGGATATCCCGGCGGTTATCATCTCTGCCAAGGAGGCTGCTGATGGTACCCTTACTGTCTACCGAGCTATCGGCGGGACAATCACTAAGGTTGCCACTGGTCGCTATCAGATTACGTTCACTAACCCAATGCAGACCGCTCAGTTCACCTTCACGATGACAGCAGCACATCCGGGAAGTGTTCGCCAAGCCTACACTGCGTCCGCCATTGGTGTCGATGGGTTGACTCTAGGCGTCAAGGACTCGGCTGGTACAGATACGTATTCTGAGTACATCCGCTTCATTGCTTATAACTACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
40c3fc7293d14b148a6bd1460c9530834b8877e978074a2ef9303ea44cbe5d3a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7812
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The complete genome of Klebsiella pneumoniae phages Fang,Q., Luo,H., Feng,Y. and Zong,Z. 2016-02 — GenBank