Protein

View in Explore
Genbank accession
AUR99038.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MTIISVISGQDTLDEVSGVKRSGEVVNRGQRRGVEGESYTLEAIEADVGEKEAFKVYNAVPCPNLGTSMFSLKGHEGMDGSNGQYRGGRTYIYDASGAVIGGFYFEAQRKARYYVPVLNEWRYAMDEYIGHDADYDLDWCVDYKLQSHPDAGSSWLVITTWMSGFILKVDMVVVDTAQAEALTPHYVSVRGTQGYYPNYRLYYAVLTSGRSAHNLLVKAIRYTVDGSMQQQSEGNVAQINNLGGDPEAASVIFRENQTRASFTSAAIADNWFARHRIIGLYNCFLATAGASGIDRVKGFIRTGDGGLHYTAEHALNIRTFLNSYKEVHEVNPVTGQPWTGAEINALEYGVYAYDNNAIVPDIYVNFVGQHDSVDIVDETGNTTWTAGGAAKISTLFTNEGSPTLNVSTGGHALGDGTMLGDGLTSFTVEGTVYPTSLTSAGQMLVDYTPQGGAGEYPAVKMTDTDIEFSINGVVLLSAPVNIPLNDWTHWALTRDGSVWRLFINTLKVGEVSHTTTLATATTAGRPALACSGETLGDNQFLGYLDNFTVTLGVAKYE
Physico‐chemical
properties
protein length:557 AA
molecular weight: 60466,54830 Da
isoelectric point:4,86243
aromaticity:0,10592
hydropathy:-0,17630

Domains

Domains [InterPro]
DC_2085
STR
309–556
DC_2085
G3DSA:2.60.120.200
STR
414–549
G3DSA:2.60.120.200
IPR013320
STR
421–549
IPR013320
PF13385
LEC
423–549
PF13385
AUR99038.1
1 557
Architecture
STR
STR 309-556 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUR99038.1
1 557
Domain Start End Length (AA) Confidence
N-terminal 1 26 26 0,9328
Central domain 27 229 204 0,6414
C-terminal 230 557 327 0,6310
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-26
Central
27-229
C-terminal
230-557

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.261.O._10N.286.51.A7
[NCBI] 		1881237 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio breoganii
[NCBI] 		553239 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR99038.1 [NCBI]
Genbank nucleotide accession
MG592625.1 [NCBI]
CDS location
range 19535 -> 21208
strand +
CDS
ATGACAATTATCTCTGTAATTTCAGGGCAAGACACTCTGGATGAAGTCAGTGGCGTAAAGCGAAGTGGGGAAGTAGTAAATCGTGGACAACGTCGGGGAGTAGAAGGGGAATCTTATACCCTTGAAGCTATTGAAGCAGATGTAGGGGAGAAGGAGGCGTTCAAAGTATACAACGCTGTACCGTGCCCTAACCTTGGTACATCCATGTTCAGTCTGAAAGGTCATGAAGGAATGGATGGTTCCAATGGACAGTACCGAGGGGGACGAACTTATATCTATGATGCGTCAGGTGCCGTAATAGGAGGTTTCTACTTTGAAGCCCAACGTAAAGCCCGTTACTACGTTCCTGTTCTAAATGAATGGCGATACGCTATGGATGAGTATATTGGGCATGATGCAGACTACGACTTAGATTGGTGTGTTGACTACAAACTACAGAGCCACCCTGACGCAGGAAGCTCTTGGTTAGTCATCACTACATGGATGAGTGGGTTCATCTTAAAGGTTGATATGGTGGTGGTAGATACTGCACAAGCTGAAGCGTTAACTCCTCATTATGTATCTGTGCGTGGTACTCAAGGCTATTACCCTAATTACCGTCTGTATTATGCTGTGCTTACAAGTGGGCGCAGTGCACATAACCTTTTGGTTAAAGCTATTCGCTACACTGTAGATGGCTCTATGCAACAGCAATCTGAAGGTAATGTCGCACAGATTAATAACCTCGGAGGTGACCCAGAAGCAGCCTCAGTTATCTTCCGTGAAAACCAGACTAGAGCATCCTTCACCTCCGCAGCCATTGCAGACAACTGGTTTGCTCGCCACCGCATTATTGGCTTGTATAACTGTTTCCTTGCAACAGCAGGAGCATCAGGGATTGACCGAGTAAAAGGGTTTATTCGTACAGGAGATGGTGGACTCCACTACACTGCGGAACATGCCTTAAACATTCGTACTTTCTTGAATAGTTATAAAGAGGTTCATGAAGTGAATCCTGTTACAGGACAGCCTTGGACAGGGGCGGAGATTAACGCATTAGAATATGGTGTTTATGCATACGATAATAATGCGATAGTTCCTGACATCTACGTGAATTTTGTAGGTCAGCATGACAGCGTGGACATTGTGGATGAAACAGGTAACACCACATGGACAGCGGGAGGTGCAGCGAAGATAAGTACCTTATTCACTAACGAAGGTAGCCCTACTCTAAATGTATCTACAGGTGGTCATGCTTTAGGGGACGGAACCATGCTAGGGGATGGGCTTACCTCATTCACAGTAGAAGGAACTGTGTACCCTACCTCACTCACTTCAGCAGGCCAAATGCTTGTAGATTACACCCCTCAAGGTGGGGCAGGTGAGTACCCTGCCGTGAAGATGACGGACACAGATATAGAGTTCAGCATCAATGGTGTGGTTCTACTATCAGCCCCTGTGAATATTCCTCTGAATGATTGGACACATTGGGCACTTACCCGTGATGGAAGTGTTTGGAGATTGTTTATCAATACTCTTAAAGTAGGTGAAGTTTCTCACACGACTACTCTTGCTACAGCAACTACAGCAGGAAGACCTGCCCTAGCGTGTAGTGGTGAAACCCTAGGGGATAATCAGTTCCTTGGTTACTTGGATAACTTTACAGTGACTTTAGGAGTAGCGAAGTATGAGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
ae949982446e140d504714e9a9814d877ff62b3e815d21208a611ee50f5ed186
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5571
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank