Protein

View in Explore
Genbank accession
QIO00139.1 [GenBank]
Protein name
putative pore-forming tail tip protein
RBP type
TF
Evidence RBPdetect
Probability 0,78
Protein sequence
MTDKLIRELLIDVKQKGATRTAKSIENVSDALENAAAASELTNEQLGKMPKTLYSIERAADRAAKSLTKMQASRGMMGITKSIDSIGAKLDDLAIAMIEVSDKLESGFTHVGKSVKAMGNDVAAATEKVQDRLYDTNRVLSGTTRGFNDTTTSAGRASRALGNTSGSARGATRDFAAMAKVGGSLPLMYAAIASNVFVLQSAFEQLKMGDQLNRLEKFGTIVGTQTGTPVQTLARSLQEAAGYAISFEEAMRQASSASAYGFDAEQLNKFGLVARRAAAVLGVDMTDALNRVIKGVSKQEIELLDELGVTIRLNDAYADYVKQLNAANTGITYNVNSLSTFQKQQAYANAVIAESTKRFGYLDDVLRATPWEQFAANADAALRKVQQAAAKYLGPVIDSINAVFYTSQASISASAARAQEETNRQIDPANVGAVALSLSASEEGYNKALDMYKESLEKRNKLKADLDKRMQQADASTAGAIRLVAQGAPVGLAAGGFEVGGVRIGSSEENQKFIADTAALALQVERLDKEVEDSTSNLNAWKSAYQAAGAAAAKANPEFQKQINLQKDMNDPDAVYDFNSATLKGLTEQQKAYDQAKKTASDLANDIQNIAQNTNTAAKTSASLSDTIKTIESLSAGTGKNADEYVKSLNLGYNTLSEMKTASQALAGYVKLTGNETKNQLEVQQKIAEVYNQTKDKEKAQEAGRRLEIQQLEEQEAALKRVLETNKGNKAIEGEIAKIQLERIKITNQGMEAQKKVKDYTDKILGVDREIALLNNRTMTDTQYRLAQLNLELTVEKEKYAWYTKQADKQKEAEQSRRAQAQIEREIWKFRQDQQVEMASGRERALNISQTSRNVTGESQRLTEQQALYQSLLEITKGNAQAQEEYKRKIQETSAALAQLKMQRDAQMQQQVTSSVGGVYTPTTGLEGDDKANMDMQNRMASYDQAISKLSELNSEATAVAQSMGNLTNAMIQFSQGSLDTTSLVAAGMQTVSSMIQYSVGQQVSAIDAAIAAEQKRDGKSEQSKAKIKKLEAEKLKIQQDAAKKQIIIQTAVAVMQAATAVPYPFSIPLMVAAGLAGAMALAQASSASGMSSIGDSGAETAGYLTLGERQKNVDVSMSANAGELSYIRGDQGIGNANSFVPRAEGGNMYPGVSYQMGEHGTEVITPMVPMKATPTDELKGSSKGTSGRPIVLNISTMDAASFRDFASSNSAAFMDAVEQALNENGTTLKSLGNS
Physico‐chemical
properties
protein length:1235 AA
molecular weight: 132889,73510 Da
isoelectric point:5,78390
aromaticity:0,05101
hydropathy:-0,42559

Domains

Domains [InterPro]
IPR056207
TAS
1–81
IPR056207 DC_0073 IPR056208
Coil
Unmapped
524–544
Coil Coil Coil Coil Coil Coil
QIO00139.1
1 1235
Architecture
TAS
STR
TAS
TAS 1-81 | STR 82-1197 | TAS 1198-1233 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage beppo
[NCBI] 		2713280 Uroviricota > Caudoviricetes > Demerecviridae > Epseptimavirus > Epseptimavirus beppo
Host Salmonella enteritidis
[NCBI] 		149539 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIO00139.1 [NCBI]
Genbank nucleotide accession
MT074455 [NCBI]
CDS location
range 23598 -> 27305
strand +
CDS
ATGACTGATAAGCTAATACGAGAACTACTTATAGATGTAAAGCAGAAAGGGGCAACCCGTACTGCAAAATCTATTGAGAACGTTTCCGATGCGTTAGAAAATGCTGCTGCCGCTTCCGAACTGACTAATGAGCAGTTAGGAAAAATGCCCAAAACTCTTTACTCCATTGAGAGGGCAGCGGATAGAGCAGCTAAAAGCCTAACTAAAATGCAGGCTAGCAGAGGTATGATGGGTATCACCAAATCTATAGATAGTATTGGTGCTAAGTTAGATGACCTTGCTATTGCTATGATTGAGGTATCCGATAAGCTAGAGTCTGGATTTACACATGTTGGTAAATCTGTTAAGGCGATGGGTAACGATGTAGCTGCTGCAACTGAAAAAGTTCAAGATAGATTATACGATACAAACCGTGTTTTGTCGGGTACTACTAGAGGCTTCAATGATACTACCACATCCGCAGGTCGTGCTAGTCGTGCTCTAGGTAATACATCTGGTTCTGCACGTGGTGCTACTCGTGACTTCGCAGCAATGGCTAAAGTTGGTGGTTCTCTACCTCTTATGTATGCTGCTATCGCATCTAACGTGTTCGTTCTACAATCTGCATTCGAACAACTTAAGATGGGTGACCAGTTAAACCGTCTGGAGAAGTTCGGTACTATTGTAGGTACTCAAACAGGTACTCCTGTACAAACTCTAGCTAGATCTCTACAAGAGGCTGCTGGTTATGCAATCTCCTTCGAAGAAGCAATGAGACAGGCATCCTCTGCTTCTGCATATGGATTCGATGCTGAACAACTTAATAAATTTGGTCTAGTAGCTCGTCGTGCTGCTGCTGTTCTTGGTGTTGATATGACTGATGCACTTAACCGTGTAATCAAGGGCGTATCTAAACAAGAAATCGAACTTCTGGACGAACTTGGTGTTACTATTCGTCTTAACGATGCTTACGCAGACTACGTTAAACAGTTAAATGCTGCTAACACAGGTATTACATATAACGTTAATAGTCTCTCTACTTTCCAGAAGCAACAAGCATATGCTAACGCAGTTATCGCTGAATCTACTAAACGTTTCGGCTATCTTGATGATGTACTTCGTGCAACCCCCTGGGAACAGTTTGCTGCTAATGCTGATGCTGCACTGAGAAAGGTTCAACAGGCTGCTGCTAAGTATTTAGGGCCAGTAATTGATTCTATCAACGCAGTGTTCTATACTTCTCAAGCATCTATCTCGGCCTCTGCTGCTAGAGCACAGGAAGAAACTAACCGCCAGATTGACCCAGCTAACGTTGGTGCTGTAGCTTTAAGTCTTTCCGCTTCTGAGGAAGGATATAATAAAGCTCTTGATATGTACAAAGAATCTCTAGAAAAGCGTAATAAGTTAAAAGCTGATCTAGATAAGCGTATGCAGCAAGCAGATGCATCTACAGCAGGGGCTATTCGTTTAGTTGCTCAAGGTGCACCGGTAGGGTTAGCTGCAGGAGGTTTTGAAGTAGGAGGAGTTCGCATAGGATCTTCTGAAGAAAACCAGAAATTCATTGCAGATACTGCTGCATTAGCTCTCCAGGTAGAGCGTCTTGATAAGGAAGTAGAGGATTCAACTAGCAATCTTAATGCATGGAAATCGGCATACCAAGCTGCTGGTGCTGCGGCTGCTAAGGCTAACCCAGAATTCCAGAAGCAGATTAATCTGCAGAAGGATATGAATGACCCTGATGCGGTTTATGACTTTAACTCTGCAACCCTGAAAGGACTGACAGAACAGCAGAAAGCATATGATCAGGCTAAGAAAACTGCTAGTGATTTAGCTAACGATATCCAGAACATCGCTCAGAACACTAACACTGCGGCTAAAACTAGTGCATCCCTATCAGATACGATTAAGACTATTGAGTCTTTATCTGCTGGTACTGGTAAAAATGCTGATGAGTATGTTAAGAGCCTGAACTTAGGGTATAATACTCTTAGTGAGATGAAGACTGCTTCACAAGCTCTTGCTGGTTACGTAAAATTAACTGGTAATGAGACTAAGAATCAGTTAGAAGTTCAGCAGAAAATTGCAGAAGTATACAACCAGACTAAGGACAAAGAGAAAGCACAGGAAGCTGGTAGACGTCTGGAAATCCAACAGTTAGAAGAACAGGAAGCAGCTCTTAAGCGTGTCCTAGAAACTAACAAGGGTAACAAAGCAATCGAAGGTGAGATAGCTAAGATTCAGTTAGAACGTATCAAGATCACTAACCAGGGTATGGAAGCTCAGAAGAAGGTTAAGGACTATACTGATAAGATTCTTGGTGTTGATCGTGAAATCGCTCTCCTGAATAACCGTACTATGACAGATACTCAGTATCGTTTAGCTCAGTTGAACCTTGAACTGACTGTCGAGAAAGAGAAGTACGCATGGTATACTAAACAGGCTGATAAGCAGAAAGAAGCAGAACAGTCAAGACGTGCTCAGGCACAGATTGAACGTGAAATCTGGAAGTTCCGTCAGGATCAGCAGGTGGAAATGGCTTCTGGACGTGAAAGAGCTCTTAATATTTCACAGACTAGCAGAAACGTTACGGGGGAATCTCAGAGACTAACCGAACAGCAAGCTCTGTACCAAAGTTTACTGGAAATTACAAAAGGAAATGCACAAGCTCAGGAAGAGTATAAGCGTAAAATCCAAGAAACTTCGGCAGCTCTAGCACAGCTTAAGATGCAACGTGATGCTCAGATGCAGCAGCAAGTCACTTCTTCTGTTGGTGGTGTTTACACTCCAACAACTGGACTGGAAGGAGATGATAAAGCAAATATGGATATGCAGAATAGAATGGCATCCTATGACCAGGCTATTTCTAAGCTGTCTGAACTGAACTCCGAAGCAACTGCTGTAGCACAAAGCATGGGTAACCTAACTAATGCTATGATCCAGTTTTCACAAGGATCTCTGGATACCACTTCTCTAGTAGCGGCTGGTATGCAAACTGTATCTTCAATGATTCAGTATAGTGTTGGTCAACAGGTAAGTGCTATTGATGCAGCTATTGCAGCAGAACAGAAACGTGATGGTAAATCTGAGCAATCTAAAGCTAAGATCAAGAAGTTAGAGGCTGAAAAGCTCAAGATCCAGCAAGATGCGGCTAAGAAGCAAATCATTATCCAGACGGCAGTAGCGGTGATGCAGGCAGCAACAGCTGTTCCGTATCCATTCTCTATTCCTCTGATGGTTGCGGCTGGTTTAGCAGGTGCTATGGCTCTTGCTCAAGCATCCTCTGCATCTGGTATGTCTTCTATTGGGGACTCTGGTGCTGAGACAGCTGGTTACTTAACTCTTGGAGAGCGCCAGAAGAACGTAGACGTTTCTATGTCGGCTAACGCAGGTGAGCTTTCTTATATTCGAGGAGATCAAGGGATTGGTAATGCTAACTCTTTCGTACCCCGTGCAGAAGGTGGTAATATGTATCCTGGAGTTAGTTACCAGATGGGTGAACATGGTACCGAAGTAATCACTCCTATGGTTCCGATGAAGGCTACTCCTACTGATGAACTCAAAGGATCTTCAAAGGGTACATCGGGTAGACCTATTGTGCTGAACATAAGTACGATGGATGCGGCTAGCTTCCGAGACTTTGCTTCGAGCAACAGTGCTGCTTTCATGGATGCCGTGGAACAGGCTCTTAATGAGAATGGAACCACCCTTAAATCGCTTGGTAATTCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
56247fbbf732e4d0b8ebbc26ac877a70a8de6b7c1452c7232e2ba054a7e07d03
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,4245
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A New High-Throughput Screening Method for Phages: Enabling Crude Isolation and Fast Identification of Diverse Phages with Therapeutic Potential Olsen,N.S., Hendriksen,N.B., Hansen,L.H. and Kot,W. 2020 — GenBank