Protein

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Genbank accession
YP_010684096.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,85
Protein sequence
MSLINLLVKRGPQLGSLQFDAVLSDDLDASVDVVQYPIETGTPIADHIIYQPIRYTMTGAVSNNPLKVSITDFTGALTNLVDDNPFIAAGAGLFAGWLSGSNETRSSTTLNTLLDFMYSGQVFTVDTGEITLNNMVIQRIGRSKDPENENGLIFVAELQQIVTLDRVANGSQPAQYQLNSNDVSSTSVSGLIERGYINVKTAATNVANQVTTLLDL
Physico‐chemical
properties
protein length:216 AA
molecular weight: 23230,81270 Da
isoelectric point:4,26954
aromaticity:0,06481
hydropathy:0,03519

Domains

Domains [InterPro]
DC_0601
STR
1–215
DC_0601
IPR048494
ATT
19–163
IPR048494
YP_010684096.1
1 216
Architecture
STR
ATT
STR
STR 1-18 | ATT 19-163 | STR 164-215 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage MEW1
[NCBI] 		2776813 Uroviricota > Caudoviricetes > Jameshumphriesvirinae > Sircambvirus MEW1 >
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010684096.1 [NCBI]
Genbank nucleotide accession
NC_071135.1 [NCBI]
CDS location
range 12792 -> 13442
strand +
CDS
ATGAGTTTAATTAACCTTCTGGTAAAGCGTGGCCCACAGCTTGGGTCGCTTCAGTTCGATGCTGTCCTGTCTGATGACCTTGATGCCAGTGTGGACGTCGTACAATACCCCATTGAGACGGGCACGCCAATTGCGGACCACATTATCTATCAGCCTATTCGCTATACGATGACGGGTGCGGTATCGAACAACCCGTTGAAAGTTAGCATTACTGACTTCACCGGGGCGTTGACAAATCTCGTCGATGATAATCCATTCATTGCTGCGGGTGCGGGTCTGTTCGCGGGGTGGTTGAGCGGCTCGAATGAAACTCGCTCCAGTACGACACTGAACACTTTGCTCGATTTCATGTATTCCGGGCAGGTATTCACGGTAGATACGGGTGAAATTACGCTGAACAATATGGTCATTCAGCGTATCGGGCGCTCTAAAGACCCGGAGAATGAGAACGGACTGATATTTGTTGCTGAACTGCAGCAGATTGTCACGCTTGACCGCGTGGCTAACGGTTCACAACCGGCACAGTATCAGCTGAACAGTAATGACGTTTCCAGCACATCCGTATCCGGACTGATTGAGCGTGGCTACATTAATGTGAAGACAGCCGCAACGAATGTCGCCAATCAGGTTACGACACTTTTGGATTTGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
5fa687d50c3450061cd4708cbf1dcb495744e419f6f86a3beb1437de73b111b0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7394
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The component parts of bacteriophage virions accurately defined by a machine-learning approach built on evolutionary features Thung,T.Y., White,M.E., Dai,W., Wilksch,J.J., Bamert,R.S., Rocker,A., Williams,D.E., Huang,C., Schittenhelm,R.R., Barr,J.J., Jameson,E., Mcgowan,S., Zhang,Y., Wang,J., Dunstan,R. and Lithgow,T. — — GenBank