Protein

View in Explore
Genbank accession
CCD22106.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MAALRPGPVLILLLVVLSTAAPLADAGVQDWVTPGLVLDASPHLWLRMADTLVQRLYDPGLNLFRETWGTPEGRCWYWNTEQGEAAQIAVYLNDSTLLSSLLAAYKQYLIYESQSGQVYLFSRYTPCSTIRQLSLDPQNFSLGNLIVNIGGDLAGTRTDVPDYHRVVALSLDIYKDPTNIYEQDKAWPNMWYTANLKSHEVWYLAPGDTTDYKGIWDTSDGSLGTGSITSYSVRVEQATDPTTNTTYDVGVAERTMEDANLSYTQRFVLEPRKPYVKVELTVTNKSQVDTLSNVRVTLAFDNLDWWLYKYVYIPGVGLIDASTSGTQINTGEKEYHLARTWEGFWQPVTDSSGRAWWPSIIYADRPLGMNRGLLVLVDGNYGVNFWGYGNYQAPQKDLYGVPAYTDWYYRWLKYEVVVGDLPPGASKTVEILIVPMASYAPGLEDLYIEMASKLDQLEGRDFSYAVNTGTGAFKGLAMARIILAYLNQGDHQFAQRILDTVGQVMEAWGWMVSTRALSNYILSLVYLYDYTGDRTYLDRAEAAAQTLLQAQIRDPQDPRNGGFLDIVYPYGVATYLDVNAEAAHALLALWERTGDTAYREAVDYWLQNWFRREQDTGRWYYYRYKSLEDAPSEYWYKGYLDEKQPYAQGYFLQALAKLYWSDERLLVSFNRIMELLSDEYWELTWEGADETNVETQSSAAAGLREYLLALAGGAGAAVEYVRGGELASVVYEKYGSMVDPSTGLRFTLGRMVITVSKPPLALATVAVYLPSGLLLEVLVDGVPARQVQQLADLALSPESYYFDGSLVYVRLQSAGEVAIVYQWVESGESNVYSPEVSTPVVEQPPTVTPPSVGVTLPQWLEPYKGLLAVGLIVASAMLATEASAPVFALAAAGLAGVFVASGWLTIPQAVLGLAFAAAGLGLIVMRKRG
Physico‐chemical
properties
protein length:929 AA
molecular weight: 103395,66150 Da
isoelectric point:4,62081
aromaticity:0,12594
hydropathy:-0,06394

Domains

Domains [InterPro]
IPR008928
ATT
475–709
IPR008928
G3DSA:1.50.10.20
STR
477–680
G3DSA:1.50.10.20
CCD22106.1
1 929
Architecture
ATT
ATT 475-709 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeropyrum pernix spindle-shaped virus 1
[NCBI] 		1032473 Viruses > unclassified viruses > unclassified archaeal viruses >
Host Aeropyrum pernix K1
[NCBI] 		272557 Archaea > Crenarchaeota > Thermoprotei > Desulfurococcales > Desulfurococcaceae > Aeropyrum

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CCD22106.1 [NCBI]
Genbank nucleotide accession
HE580238.1 [NCBI]
CDS location
range 11687 -> 14476
strand +
CDS
GTGGCCGCTTTGAGGCCCGGCCCGGTCCTGATACTGCTGCTGGTGGTGCTATCGACCGCGGCCCCTCTGGCGGATGCTGGGGTGCAGGACTGGGTCACGCCTGGCCTCGTCCTGGACGCCTCACCCCACCTCTGGCTCAGGATGGCCGATACACTTGTGCAGAGGCTCTACGACCCCGGCCTCAACCTGTTCAGGGAGACCTGGGGCACCCCTGAGGGGCGGTGCTGGTACTGGAATACTGAGCAGGGCGAGGCGGCTCAGATCGCGGTCTACCTCAACGACTCCACCCTCCTCTCGAGCCTCCTAGCAGCGTACAAGCAGTACTTGATATACGAGTCCCAGAGTGGCCAAGTCTACCTGTTCTCCCGGTACACTCCCTGCAGCACGATAAGGCAGCTCAGCCTAGACCCCCAGAACTTCAGCCTCGGCAATCTGATAGTGAACATTGGAGGGGACCTGGCGGGGACTAGGACTGATGTACCTGACTACCACAGGGTGGTAGCCCTCAGCCTAGACATCTACAAGGACCCCACTAACATCTACGAGCAGGATAAGGCGTGGCCCAACATGTGGTACACGGCCAACCTGAAGAGCCACGAGGTCTGGTACCTGGCGCCGGGCGACACCACGGACTATAAGGGAATTTGGGATACCTCTGACGGTAGCCTGGGTACGGGCAGCATCACGAGCTACAGTGTTAGGGTCGAGCAGGCCACGGACCCCACCACCAACACCACCTATGATGTTGGCGTGGCGGAGAGGACTATGGAGGACGCAAACCTAAGCTACACCCAGCGCTTCGTACTGGAGCCCAGGAAGCCCTACGTCAAGGTGGAGCTAACGGTCACCAACAAGAGTCAGGTGGACACTCTGAGCAACGTGAGGGTGACCCTGGCCTTCGACAACCTGGACTGGTGGCTCTACAAGTATGTCTACATCCCTGGGGTGGGCCTGATAGACGCCTCCACCAGCGGGACCCAGATTAACACGGGTGAGAAGGAGTACCATCTCGCAAGGACCTGGGAGGGCTTCTGGCAGCCAGTAACGGACTCTAGCGGCAGGGCCTGGTGGCCCAGCATAATCTACGCCGACAGGCCCCTAGGCATGAACAGGGGGCTACTGGTCCTGGTTGATGGAAACTACGGGGTGAACTTCTGGGGCTACGGCAACTACCAGGCCCCGCAGAAGGACCTCTACGGCGTCCCCGCCTACACGGACTGGTACTACAGGTGGCTGAAGTACGAGGTGGTGGTTGGGGACCTGCCGCCGGGCGCCTCGAAGACGGTCGAGATTCTGATAGTACCTATGGCTAGCTACGCCCCTGGCCTGGAGGACCTCTACATCGAGATGGCCTCGAAGCTCGACCAGCTGGAGGGCCGGGACTTCAGCTACGCAGTGAACACGGGCACTGGGGCCTTCAAGGGCCTCGCCATGGCCAGGATTATCCTCGCCTACCTCAACCAGGGTGACCACCAGTTCGCCCAGAGGATCCTGGACACTGTGGGCCAGGTTATGGAGGCCTGGGGCTGGATGGTGTCGACCAGGGCCCTCAGCAACTACATCCTGTCGCTGGTGTACCTCTACGACTACACGGGCGACAGGACCTACCTGGACAGGGCCGAGGCCGCCGCGCAGACCCTACTCCAGGCCCAGATAAGGGACCCCCAGGACCCGAGGAACGGGGGCTTCCTGGACATAGTTTACCCCTACGGCGTCGCCACCTACCTGGACGTGAACGCCGAGGCCGCCCACGCCCTCCTGGCCCTGTGGGAGAGGACGGGGGACACCGCTTACAGGGAGGCTGTGGACTACTGGCTCCAGAACTGGTTCCGCAGGGAGCAGGATACGGGTAGGTGGTACTACTACAGGTACAAGAGCCTCGAGGACGCGCCCAGCGAGTACTGGTACAAGGGCTATCTTGACGAGAAGCAGCCATACGCCCAGGGCTACTTCCTCCAGGCCCTCGCGAAGCTGTACTGGAGTGATGAGAGGCTCCTGGTATCCTTCAACAGGATAATGGAGCTGCTCAGTGACGAGTACTGGGAGCTGACTTGGGAGGGTGCTGACGAGACCAACGTGGAGACCCAGAGCAGCGCGGCGGCGGGCCTGAGGGAGTACCTGCTCGCCCTGGCTGGAGGGGCAGGCGCGGCCGTAGAGTACGTTAGGGGCGGGGAGCTGGCCTCTGTGGTTTACGAGAAGTACGGTAGCATGGTCGACCCTTCAACCGGGCTTAGGTTTACCCTGGGCAGGATGGTCATCACCGTCTCGAAGCCTCCCCTGGCCCTTGCAACCGTCGCCGTCTACCTGCCGTCAGGGCTGCTTCTCGAGGTTCTGGTTGACGGAGTCCCCGCTAGGCAGGTGCAGCAGCTCGCCGATCTGGCTCTGAGCCCGGAGTCCTACTATTTCGACGGGAGTTTGGTGTATGTTAGGCTGCAGAGCGCCGGGGAGGTGGCGATCGTCTACCAGTGGGTGGAGAGCGGCGAGAGCAACGTCTACAGCCCCGAGGTGTCGACGCCTGTTGTGGAGCAGCCCCCCACCGTCACCCCGCCTAGCGTGGGCGTGACGCTCCCCCAGTGGCTCGAGCCGTATAAGGGGTTGCTGGCCGTGGGGCTTATCGTGGCGTCGGCTATGCTGGCCACAGAGGCCTCGGCCCCCGTGTTTGCCCTGGCCGCCGCCGGGCTGGCCGGGGTGTTCGTCGCCAGCGGCTGGCTCACTATACCCCAGGCCGTGCTGGGCCTCGCGTTCGCGGCCGCCGGGCTGGGACTGATCGTCATGAGGAAGAGGGGCTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
0ba330a1c489c646c80c038992dfe8ff10218ddd43ef5d3aba2dba66682e582f
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,6867
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Provirus induction in hyperthermophilic archaea: characterization of Aeropyrum pernix spindle-shaped virus 1 and Aeropyrum pernix ovoid virus 1 Mochizuki,T., Sako,Y. and Prangishvili,D. 2011 21784945 GenBank