Protein

View in Explore
Genbank accession
QZI87676.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MLYIWTPSGDFASSAREVTNISNDDLGGWTVTTTTGTFTFLDRDAYGNRDLQGFASGSTVSPLGWGLNKPGVNNADAIQAALAHCQANDVSFLGAPVDVATDKTIFLPNFPSFNVHQIIDFAGMRIRPDDTVFKPMESGKLENGVWVSAMMDPLLDNPTFNTTLTGLVFVRTDPETKNGRVALGLKDWHQNCTLGTLIARNFQSALDSFNNFYLKYGNLKLQNAALASGERTGIGFIFRSNNNLNSIEQLVSINVDQGYLFEGLVTGLHIENISLELQNNGLVTTGEVRGMAVLGSYGEYNNVDSENFFDFQGPVFNVGIDGCYFVSSNPDTHIINSISSPRSAISFGKNNNLAGMLDETKIFRNKSWGFRTLGSPSESFGSNGSNLIFREDDLGVGTVVEKYAIDVFTGNATFSVGNVHNEIIPANYSGRMTRGFNSSRQPGLFNPVKDEVNGILTLSTKILNSTSQLVYFSARVADFINTKTWFVQIVGGVVYNFDGSVSSDITFTVDSDGFLVIRVAGIAAGNPFNFTGGEIRVI
Physico‐chemical
properties
protein length:538 AA
molecular weight: 58426,59360 Da
isoelectric point:4,82656
aromaticity:0,10967
hydropathy:-0,06877

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QZI87676.1
1 538
Domain Start End Length (AA) Confidence
N-terminal 1 73 73 0,9693
Central domain 74 373 301 0,9791
C-terminal 374 538 164 0,9826
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-73
Central
74-373
C-terminal
374-538

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 219E41.2
[NCBI] 		2859312 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio crassostreae
[NCBI] 		246167 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QZI87676.1 [NCBI]
Genbank nucleotide accession
MW824385.1 [NCBI]
CDS location
range 169 -> 1785
strand +
CDS
TTGCTTTACATTTGGACTCCAAGTGGTGACTTTGCATCATCAGCAAGAGAAGTAACAAATATTTCAAATGATGATCTAGGTGGTTGGACTGTTACCACGACAACAGGAACGTTTACCTTTCTTGATAGAGACGCTTACGGCAATAGAGATCTTCAAGGCTTTGCTTCGGGTTCAACCGTTAGTCCTTTAGGGTGGGGTCTTAATAAGCCGGGTGTAAATAATGCTGACGCAATTCAGGCAGCATTGGCGCATTGCCAAGCAAATGACGTTTCATTCCTTGGCGCTCCTGTTGATGTGGCAACCGACAAGACCATATTCTTGCCAAACTTTCCGTCTTTTAATGTTCATCAGATTATTGATTTTGCAGGGATGAGAATAAGACCAGACGACACCGTTTTTAAGCCTATGGAGTCGGGGAAATTAGAAAATGGTGTTTGGGTTAGTGCAATGATGGATCCGCTACTAGATAACCCGACATTTAACACGACCCTTACAGGCTTGGTTTTTGTAAGAACCGACCCAGAAACAAAAAACGGGCGAGTTGCTTTGGGCTTAAAAGATTGGCATCAAAACTGCACTCTAGGCACCTTAATTGCTCGAAACTTCCAATCAGCGTTGGATAGTTTTAATAACTTCTATCTAAAGTACGGGAACCTAAAGCTGCAAAACGCAGCACTGGCTTCTGGTGAAAGAACGGGCATAGGTTTCATTTTTAGATCTAATAACAACCTAAACAGCATTGAGCAGTTAGTTTCTATTAATGTTGATCAAGGTTATTTATTTGAAGGGCTTGTTACGGGGCTTCACATTGAAAATATATCGCTAGAACTTCAAAATAATGGACTGGTTACAACTGGTGAAGTTAGAGGTATGGCGGTTCTTGGTAGTTATGGCGAGTATAACAACGTTGATAGTGAAAACTTTTTTGATTTCCAAGGCCCGGTCTTTAACGTGGGGATCGATGGTTGTTACTTTGTTTCAAGTAATCCAGACACGCATATTATAAATTCAATATCAAGCCCAAGGTCTGCCATATCTTTTGGTAAGAACAACAACTTAGCAGGAATGCTAGATGAAACAAAAATTTTCAGAAATAAAAGCTGGGGATTTAGAACCCTAGGATCACCAAGTGAATCATTTGGCAGTAACGGTTCTAATTTGATTTTCAGAGAAGACGATCTTGGCGTGGGAACTGTTGTTGAAAAGTATGCAATCGATGTGTTTACGGGGAATGCTACATTTAGCGTAGGAAATGTTCACAACGAAATAATTCCCGCTAATTATTCTGGCCGAATGACAAGAGGATTTAACTCAAGCCGCCAGCCGGGATTATTCAACCCTGTAAAAGATGAAGTTAACGGAATTTTAACCCTAAGCACTAAGATATTGAACAGCACTTCTCAGCTTGTTTATTTTTCTGCAAGAGTGGCAGATTTTATAAACACTAAAACTTGGTTTGTTCAAATTGTTGGCGGTGTTGTTTACAATTTTGATGGTTCAGTAAGTAGCGATATTACATTTACTGTAGATAGTGATGGTTTCTTAGTGATTAGAGTTGCAGGGATAGCAGCGGGGAACCCTTTTAACTTTACTGGTGGTGAAATAAGAGTGATATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
983234b144b788f7d63cb6806bd13c6727eab4fb0cd328160c8526d82f467235
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5839
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50