Protein

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Genbank accession
QHZ59451.1 [GenBank]
Protein name
BppU domain protein
RBP type
TF
Evidence RBPdetect
Probability 0,87
Protein sequence
MTNYIMANSYAFDGTDDFIHGVYEVDETLTTVKILLNGTDTNLNAIAGFTNGTTFMADVSTIKSQITLTTVVTMIMYNGTKELARCPVPIYSQANPPVPKSADKKYTLALDLVKDTENVVLISRIADKDLTSVLVKLTNNGEAINLVGRTPLFECQLPAQTGEYANFVRDDGIANGNMIIVDAEQGIIQYNFVKETFSKVGAINIAYFALETLVGDVVRRVTTRNFKIIVTDSAIEGKIDADDYISDIESLKAEIEIRLAPIIEEIVQLKEDVTEASAQMDEIEALITANQVIKTEDAINWQKQKITDDTGANLLTTGSDTSKDILDIIKTAGIGLRTFYAVSGAVNNPTANTPLRGISHLTTATTGWVIGWDSFGNSYSTFLNGTAGWVLPWKENATMSDVANQLATAVSTLNTRMDSMQNIQLFDNSGVPIVNLDTDSGLDIYTELNKVPAGMYMTRISGTAGTTNPNTNVPPTTIRGYTYIEVQGTWGNLYGVGSNQTMVMNQLNSGVWKGWRVQDARDTGWINITGFNSGWSTDATNPPAYRKVGNKVSLRGVVHMDTAAKKGVIATLPAGYRPMVGNQNGWICARQTTGVNYMAEVYVSSAGNLEVVWINGNGTQGIWLTPIEFYID
Physico‐chemical
properties
protein length:632 AA
molecular weight: 68790,88530 Da
isoelectric point:4,67594
aromaticity:0,08070
hydropathy:-0,09146

Domains

Domains [InterPro]
DC_0893
ATT
1–103
DC_0893 IPR018913 Coil
G3DSA:2.60.40.3350
ATT
104–236
G3DSA:2.60.40.3350
DC_1681
STR
120–632
DC_1681
QHZ59451.1
1 632
Architecture
ATT
STR
ATT 1-255 | STR 256-632
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Listeria phage LP-018
[NCBI] 		2590048 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Listeria monocytogenes
[NCBI] 		1639 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QHZ59451.1 [NCBI]
Genbank nucleotide accession
MN904502 [NCBI]
CDS location
range 60276 -> 62174
strand +
CDS
ATGACTAACTATATCATGGCAAACTCCTACGCCTTTGACGGCACGGATGATTTTATTCATGGCGTTTACGAGGTAGACGAAACATTAACTACTGTTAAGATATTACTTAACGGAACCGATACAAACTTAAATGCAATTGCAGGATTCACTAATGGGACAACCTTTATGGCTGACGTTTCCACTATCAAATCTCAAATCACATTAACTACTGTGGTTACAATGATTATGTATAATGGAACTAAAGAGCTTGCGAGATGTCCTGTTCCTATCTATAGCCAAGCAAATCCACCAGTTCCAAAATCAGCTGATAAGAAATACACACTTGCTTTGGATTTAGTAAAAGACACAGAAAATGTGGTGCTTATATCCCGCATCGCGGATAAGGATTTAACGTCCGTATTAGTTAAGTTAACCAATAACGGTGAAGCAATTAACTTAGTCGGACGTACTCCATTATTTGAATGTCAATTACCCGCACAAACAGGTGAGTATGCTAACTTCGTCCGTGATGATGGGATAGCAAATGGCAATATGATTATTGTAGATGCCGAACAAGGAATCATTCAATACAACTTTGTTAAAGAGACTTTCTCCAAAGTAGGGGCTATTAACATTGCCTATTTTGCTTTAGAAACTCTCGTAGGGGATGTTGTTCGCAGGGTTACAACTCGTAACTTTAAAATCATTGTAACAGACAGTGCTATTGAAGGAAAGATAGATGCAGATGATTACATTTCTGATATTGAATCTCTTAAAGCAGAAATTGAAATACGCTTAGCACCTATAATTGAAGAAATAGTTCAACTAAAAGAAGATGTAACCGAAGCAAGTGCACAGATGGATGAGATAGAAGCACTTATTACAGCTAACCAAGTAATAAAAACAGAGGATGCCATAAACTGGCAGAAACAGAAGATTACTGATGACACAGGTGCCAACTTACTTACAACTGGCTCAGACACTTCAAAAGATATTCTTGATATTATAAAAACAGCAGGAATAGGTTTACGAACATTCTATGCAGTATCAGGTGCTGTAAATAACCCAACGGCTAATACTCCTTTAAGAGGAATTTCTCATCTAACAACAGCTACAACCGGATGGGTAATTGGATGGGATTCCTTTGGAAACTCTTATTCAACTTTCTTAAATGGAACAGCTGGTTGGGTACTTCCTTGGAAAGAGAACGCCACAATGTCTGATGTTGCTAACCAATTAGCAACCGCAGTTTCTACCTTAAACACTAGAATGGATTCCATGCAGAACATCCAGCTATTTGATAATAGCGGTGTTCCTATAGTAAATCTAGATACGGACAGTGGATTAGATATTTACACAGAGCTAAATAAAGTTCCGGCTGGTATGTATATGACACGAATTTCTGGTACTGCTGGAACAACAAATCCTAATACTAATGTTCCTCCTACCACCATCCGGGGATATACCTATATTGAGGTACAAGGTACTTGGGGGAATTTATATGGAGTAGGCTCCAACCAGACTATGGTAATGAACCAACTAAATAGCGGAGTGTGGAAAGGATGGAGAGTGCAAGATGCACGAGATACTGGCTGGATAAATATCACAGGATTTAATTCTGGATGGTCAACTGATGCTACAAACCCTCCGGCATATCGTAAAGTAGGTAATAAGGTTTCATTACGTGGAGTTGTTCACATGGATACCGCTGCTAAGAAAGGTGTTATCGCAACACTTCCTGCTGGTTATCGTCCAATGGTAGGTAATCAAAATGGTTGGATATGTGCACGTCAAACCACTGGTGTTAACTATATGGCAGAGGTTTATGTAAGCAGTGCAGGTAACTTAGAGGTTGTATGGATAAATGGTAACGGAACACAAGGTATTTGGTTAACGCCAATAGAATTTTATATTGACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
34a20d18d9fe9dee1db052e56a0c21132c6c212bbae26366c5aecac9a64aeed1
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7692
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50