Protein

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Genbank accession
YP_006382777.1 [GenBank]
Protein name
tail sheath
RBP type
TSP
Evidence DepoScope
Probability 0,92
Protein sequence
MAVSGFYVRRSGYSHVGELMLAVINDLTANGFSTRFPANWVPPVDPAGRAAFSVLLEAGEKVDPLNETSLQNKQPWRIHIQVFDKHTCGITAGSQQSLRTDGTMSYTTTGTTTKTLQGPLGAMGGYYTKNNNNLATFCPDDTKPAEGFINRKSRVTIGTNGATDLSESFPMTYSLSITPRGIVFCVWEDFLSDNSAGAISWFLIQRPVNRDTGAVIKDGKAPVFCVYGANGKINRFVVRESDVLRPSEPVDATKDTDYNNAIINGMEQVAISEGNRYVVSFPSRLNTTRYAYTYELDMLGYTSADVVSENTDIPLLVYGEKNAGVDAPRTYVSLMANGPSNTGMRIAALKLGGGISLT
Physico‐chemical
properties
protein length:358 AA
molecular weight: 38829,27130 Da
isoelectric point:5,99307
aromaticity:0,09218
hydropathy:-0,21760

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_006382777.1
1 358
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0749
Central domain 11 209 200 0,0029
C-terminal 210 358 148 0,9976
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-209
C-terminal
210-358

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage Lu11
[NCBI] 		1161927 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas putida
[NCBI] 		303 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_006382777.1 [NCBI]
Genbank nucleotide accession
NC_017972 [NCBI]
CDS location
range 201772 -> 202848
strand +
CDS
ATGGCAGTTTCTGGATTCTATGTTCGTCGCAGCGGTTATTCGCACGTTGGCGAACTCATGCTTGCTGTAATTAACGACCTGACAGCAAACGGGTTTTCTACTCGTTTTCCTGCTAACTGGGTTCCGCCTGTAGACCCAGCTGGCCGCGCAGCTTTTTCGGTTTTGCTGGAAGCTGGCGAAAAGGTCGATCCGTTGAATGAAACTTCGCTGCAAAATAAGCAGCCGTGGCGCATTCACATTCAGGTTTTTGACAAACACACCTGTGGCATTACTGCCGGTTCTCAGCAATCTCTGCGTACCGACGGCACCATGTCGTATACCACTACGGGCACCACTACCAAAACCCTGCAAGGTCCGCTCGGCGCAATGGGTGGTTACTACACCAAAAACAATAACAACCTCGCAACTTTCTGCCCGGATGATACAAAACCTGCCGAAGGTTTTATTAACCGGAAATCGCGTGTAACTATCGGCACCAACGGCGCTACTGATTTGTCGGAATCTTTCCCGATGACCTACAGCCTGTCGATCACTCCACGCGGTATTGTTTTCTGCGTGTGGGAAGACTTCCTGTCGGATAACAGCGCTGGTGCAATTTCGTGGTTCCTGATTCAACGTCCGGTAAACCGCGACACTGGCGCGGTAATCAAAGACGGTAAAGCTCCGGTCTTCTGCGTGTACGGAGCTAACGGCAAGATTAACCGTTTTGTTGTGCGTGAATCTGACGTGCTGCGTCCGTCCGAACCGGTAGACGCCACCAAAGACACCGATTACAACAACGCGATTATCAACGGTATGGAACAGGTAGCGATTTCGGAGGGCAACCGCTATGTGGTTAGTTTCCCTTCGCGCCTGAATACCACGCGTTATGCCTATACCTACGAACTGGATATGCTGGGTTACACCTCGGCAGACGTGGTATCGGAAAACACTGATATTCCGCTTCTGGTTTACGGCGAGAAAAACGCTGGCGTCGATGCTCCGCGCACCTACGTTTCGCTGATGGCTAACGGTCCGTCTAACACCGGTATGCGTATTGCAGCACTCAAACTCGGCGGCGGGATTTCGCTGACTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
247a55956e6156a5511edb898c25be8ad83c4fdf1fb0dcde16f06e5072be9f57
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4309
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50