Protein
View in Explore- Genbank accession
- WRQ05347.1 [GenBank]
- Protein name
- hypothetical protein
- RBP type
-
TSP
- Protein sequence
-
MGAGILIDYNDGRPVMEITAGLRAPSFCTSFNQRAQSNKTLTINTPLTDGSRVIVALTRPVEVIEVFDQTLVIPDPFYVTSVTRNGNSGITLRGEDAYGAYSGLPQWAGVIMEVLPVGSRNAGLLVANSTDFTAISNVSKLMTCRYAQRVRVNGSMALPVGGVPFARWDDGNVSVGFDGGSIIVRNASYGGIDDVAASVDMDLVIFNNTPPTPGAGITMTNNQNQVTFSTVNKPFVYDRTINIGTGDQNIGNRLIQLSYTGALIQNNGGYNHVRMNGIRMAGNNVRVAKNRVIGNYSRQQFQMPGKNIAVPTPLLVIPNMY
- Physico‐chemical
properties -
protein length: 321 AA molecular weight: 34514,83100 Da isoelectric point: 9,11623 aromaticity: 0,07477 hydropathy: -0,04860
Domains
Domains [InterPro]
IPR045604
STR
4–297
STR
4–297
1
321
Architecture
STR 4-297 |
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
321
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 11 | 11 | 0,6946 |
| Central domain | 12 | 210 | 200 | 0,0187 |
| C-terminal | 211 | 321 | 110 | 0,9979 |
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-11
1-11
Central
12-210
12-210
C-terminal
211-321
211-321
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
Escherichia phage vB_EcoS_SD276 [NCBI] |
3108097 | Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes |
| Host |
Escherichia coli [NCBI] |
562 | cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales |
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
WRQ05347.1
[NCBI]
Genbank nucleotide accession
OR911938
[NCBI]
CDS location
range 21092 -> 22057
strand -
strand -
CDS
ATGGGCGCTGGAATACTTATCGACTATAACGATGGCAGGCCGGTAATGGAGATAACCGCTGGACTCCGCGCGCCGTCATTCTGCACCAGCTTTAACCAGCGGGCACAGTCCAACAAGACGCTAACCATTAACACCCCGCTTACGGATGGGTCGCGGGTAATCGTAGCGCTAACTCGCCCGGTAGAGGTGATTGAGGTGTTTGACCAGACCCTGGTAATTCCCGACCCGTTTTACGTTACGTCGGTTACTCGCAACGGTAATAGTGGTATCACCCTGCGCGGGGAGGATGCGTATGGCGCGTACTCCGGTTTACCACAATGGGCTGGCGTCATAATGGAAGTGCTGCCGGTTGGGTCGCGCAACGCAGGTTTACTGGTGGCCAACTCGACGGACTTCACCGCCATATCCAACGTGTCTAAGCTAATGACCTGCCGATACGCACAGCGCGTGCGCGTCAACGGTAGTATGGCCTTGCCGGTTGGCGGTGTTCCGTTCGCCCGATGGGATGATGGCAACGTATCAGTAGGCTTCGATGGCGGCAGTATTATCGTCCGCAACGCGTCCTACGGTGGCATCGACGATGTGGCGGCTTCGGTGGACATGGATTTGGTGATATTCAACAACACACCACCCACGCCAGGGGCAGGGATCACCATGACGAATAACCAGAATCAGGTCACGTTCTCGACGGTGAACAAGCCGTTCGTATATGACCGCACTATTAACATCGGAACGGGCGACCAGAATATTGGAAACCGCCTGATCCAGCTTTCATACACCGGAGCACTGATTCAGAACAACGGTGGCTATAACCACGTCCGCATGAACGGCATACGCATGGCGGGTAATAATGTGCGCGTCGCTAAAAACCGCGTCATCGGCAACTACTCGCGGCAGCAATTCCAGATGCCAGGTAAAAATATTGCAGTACCAACACCGCTACTCGTCATCCCGAATATGTATTGA
Genome Context
Genome Context
Tertiary structure
PDB ID
7bf6f8d79d26023a453e0abb16977f81a3a736ab758ef59e29f50fa1aadeceba
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50