Protein

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Genbank accession
WAB09277.1 [GenBank]
Protein name
major capsid protein
RBP type
TSP
Evidence DepoScope
Probability 0,62
Protein sequence
MANAFTGTAAMSNLVQTTYDRALEFALRAQPMFRMVADKRPVQQAMPGSSVVFSLYQDLAQAITPLNELVDPDAVAAGNPTTVSVTLNEYGNSILVSNKLDLFSFTDVTAGLVNQVAWNLVDSVDTVVRNVLDGGTNYIRDNGASGPVYNGAQTTVGTTAADTFGSAWVRLAVAKLRTNKVHPNKGSFYTSYIHPEVSHDLRAETGNAAWRPPHEYSSAQNIWSGEIGEYEGAVFIETPRTNVAVNAGAGGTVDVYNTYFTGQQALAEAVAEEFHTVRGPVVDKLTRFQPLGWYGVAGWSLYRQEALIRAESASSIAVNT
Physico‐chemical
properties
protein length:320 AA
molecular weight: 34466,97730 Da
isoelectric point:5,03641
aromaticity:0,09688
hydropathy:-0,11188

Domains

Domains [InterPro]
TIGR04387
Unmapped
9–310
TIGR04387
IPR025267
RBD
185–302
IPR025267
WAB09277.1
1 320
Architecture
RBD
RBD 185-302 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WAB09277.1
1 320
Domain Start End Length (AA) Confidence
N-terminal 1 126 126 0,8255
Central domain 127 309 184 0,0067
C-terminal 310 320 10 0,9978
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-126
Central
127-309
C-terminal
310-320

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptomyces phage Stella
[NCBI] 		2999018 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WAB09277.1 [NCBI]
Genbank nucleotide accession
OP751154 [NCBI]
CDS location
range 18370 -> 19332
strand +
CDS
GTGGCTAACGCCTTCACCGGTACTGCGGCGATGAGCAATCTCGTCCAGACCACTTACGACCGCGCACTTGAGTTCGCTCTCCGTGCGCAGCCGATGTTCCGCATGGTCGCTGACAAGCGTCCCGTGCAGCAGGCGATGCCTGGCTCTAGCGTCGTGTTCTCTCTGTACCAGGATCTGGCGCAGGCGATCACTCCGCTGAACGAGCTGGTCGACCCTGACGCGGTTGCCGCTGGCAACCCGACCACTGTTTCCGTCACTCTCAACGAGTACGGTAACTCCATCCTCGTCTCCAACAAGCTGGACCTGTTCAGCTTCACTGACGTGACCGCTGGTCTCGTCAACCAGGTGGCGTGGAACCTTGTCGACTCTGTCGACACCGTCGTTCGTAACGTCCTCGATGGCGGAACGAACTACATCCGTGACAACGGCGCTTCTGGGCCGGTGTACAACGGTGCGCAGACCACTGTAGGTACCACCGCAGCCGACACGTTCGGATCTGCATGGGTACGTCTGGCTGTTGCGAAGCTGCGCACCAACAAGGTGCACCCCAACAAGGGTAGCTTCTACACCTCGTACATCCACCCCGAGGTCTCGCACGACCTTCGTGCCGAGACTGGTAACGCCGCTTGGCGTCCACCGCACGAGTACTCTTCCGCCCAGAACATCTGGTCTGGAGAGATCGGCGAGTACGAGGGAGCCGTCTTCATCGAGACTCCTCGTACCAACGTGGCCGTGAACGCGGGTGCCGGTGGCACTGTGGACGTGTACAACACGTACTTCACCGGACAGCAGGCCCTGGCCGAGGCTGTCGCGGAGGAGTTCCACACCGTGCGTGGACCGGTAGTTGACAAGCTCACTCGTTTCCAGCCTCTCGGTTGGTACGGCGTAGCGGGCTGGAGCCTGTACCGTCAGGAGGCGCTGATCCGCGCCGAGTCTGCCAGCTCCATCGCTGTCAACACCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
5ebe49f38b67f66beb83eed24f43cfdc707b57d9515a65f573ed7111ed645de9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8635
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50