Protein

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Genbank accession
UIR90737.1 [GenBank]
Protein name
receptor-binding tail protein
RBP type
TSP
Evidence DepoScope
Probability 0,99
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MSFFAGKFSDGKTVLSLNAANGGDINQHYSPNTNSIFHSDMPFVLVDGTYEAALGDAGNGYFVTQMPWDIINIKSNDPGRVILTAIEINGTHRGFLNGTQSQVGQFLTFFEDQPRAGAELAITSAFAIGDSLAHGTYIYNGSLGHEESIARQGTGGTLLQSSGFQIFRPGGVSAGEAISRAWRLMGFPTGVSTVPIDGGNADYWEPNWQAPIGSAGRGHDWFYVCSSNIRGFAGKKGVLPDNVNVLYQSPAYPEKIYVCRGSTSNMAAQSARKVYVQDWYNVTPTKVIWYVLNLRYSNGSMGISGNPFTGSDILISPSNFTIKGVSLPNSGYKFINQNAFGNLGYRPDMEYVGNNTAYTGVFGDNTARCEFIGSSNGGLWSPVNYGGAASQISLYKFGVGKQWYVDTNTNSIGNEHGPVWSPSTVPLRLFPGNVASTYVGDDITPSYPGAGDFYTPLATVWLGLPNAHSTVILTTEVIMGNLNTAGMPVRTYGGSAWQVQGRRQQSYTAGDGVFHQILTLPPGYLVPYHSTTSYSYTQTWASRPDEMAFRRNGYIYTVKNLGNGNVELGVIIHAAEAAAIFLPRLRVTVQRLT
Physico‐chemical
properties
protein length:593 AA
molecular weight: 64100,83320 Da
isoelectric point:6,59829
aromaticity:0,12310
hydropathy:-0,18229

Domains

Domains [InterPro]
IPR059609
RBD
1–593
IPR059609
UIR90737.1
1 593
Architecture
RBD
RBD 1-593
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UIR90737.1
1 593
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,6066
Central domain 11 242 233 0,8202
C-terminal 243 593 350 0,7170
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-242
C-terminal
243-593

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage PSa2
[NCBI] 		2901176 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Enterobacteriaceae
[NCBI] 		543 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UIR90737.1 [NCBI]
Genbank nucleotide accession
OL770310 [NCBI]
CDS location
range 107215 -> 108996
strand -
CDS
ATGAGTTTTTTCGCAGGAAAATTTAGTGATGGTAAAACTGTATTATCTCTAAACGCTGCTAATGGTGGTGATATAAATCAGCACTACTCTCCAAATACTAATAGTATCTTCCACTCAGATATGCCCTTCGTCCTAGTTGATGGGACTTATGAGGCTGCCCTAGGTGATGCAGGTAATGGGTACTTTGTTACTCAGATGCCTTGGGATATTATAAACATTAAATCCAATGATCCTGGTAGAGTTATATTAACTGCTATTGAGATAAATGGTACTCATAGGGGTTTCCTTAATGGTACACAATCTCAGGTTGGCCAGTTTTTAACATTCTTTGAAGACCAACCACGTGCGGGTGCTGAATTGGCAATAACATCTGCCTTTGCAATCGGGGATAGTTTAGCTCATGGTACCTATATTTATAATGGTAGCCTAGGTCATGAGGAATCTATTGCTAGACAAGGAACTGGCGGTACTTTGCTACAATCTTCCGGTTTCCAGATCTTTAGACCTGGTGGTGTTTCTGCTGGTGAAGCTATTTCCAGAGCCTGGAGATTAATGGGCTTTCCAACGGGTGTATCTACAGTTCCTATAGATGGTGGTAATGCAGACTATTGGGAGCCTAACTGGCAAGCGCCTATCGGGTCTGCTGGTAGAGGTCATGATTGGTTTTACGTTTGTAGTTCCAATATTCGTGGCTTTGCCGGTAAAAAAGGTGTACTACCAGATAACGTAAACGTTCTTTACCAATCTCCTGCATATCCAGAAAAAATATATGTTTGTAGAGGTTCTACTTCTAATATGGCTGCTCAGTCAGCTAGAAAGGTATATGTGCAAGACTGGTATAATGTTACACCTACTAAAGTTATTTGGTATGTGCTAAATCTACGCTATTCTAATGGTAGTATGGGGATTTCTGGTAATCCATTTACTGGTTCAGATATCCTGATATCTCCATCTAACTTTACTATTAAAGGTGTTAGCTTACCCAACTCAGGCTATAAATTTATTAACCAGAATGCTTTTGGAAACTTAGGTTATCGCCCTGATATGGAGTATGTTGGTAATAATACCGCGTATACCGGAGTTTTTGGTGATAATACTGCACGATGTGAATTTATCGGCTCTAGTAATGGGGGTTTGTGGTCTCCTGTTAACTATGGGGGTGCTGCTTCTCAAATTAGCCTTTATAAATTTGGTGTTGGTAAACAGTGGTATGTAGATACTAATACCAACTCTATAGGTAATGAGCATGGCCCTGTATGGAGTCCTAGTACCGTACCACTTAGATTATTCCCAGGCAACGTTGCGAGTACTTATGTTGGGGATGATATAACTCCATCCTACCCTGGTGCTGGTGACTTCTACACACCTTTGGCCACAGTTTGGTTGGGATTACCAAATGCTCACTCTACTGTTATATTAACTACTGAAGTTATTATGGGTAATCTTAATACTGCTGGAATGCCTGTGCGTACTTATGGGGGTAGTGCTTGGCAGGTACAAGGTAGACGTCAACAAAGTTATACAGCTGGTGATGGTGTATTTCATCAGATTCTTACTCTGCCACCTGGCTATCTAGTACCATATCACAGTACAACTTCATATAGCTATACCCAAACGTGGGCTAGTAGACCTGATGAGATGGCTTTTCGTAGAAATGGGTATATTTATACAGTAAAAAACCTTGGTAATGGTAACGTTGAGTTAGGCGTTATTATCCATGCTGCCGAAGCAGCTGCTATCTTCTTACCAAGACTACGTGTAACAGTTCAACGCCTAACCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
8101568d3dda4c58290103561ab0987bf9265ed85f1da3b16547319e3d16a1b2
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,2665
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequence of the Escherichia phage PSa2 which target Escherichia salmonella strains Wan,X., Hu,X. and Yuan,Z. 2022-04-21 — GenBank