Protein

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Genbank accession
YP_009813434.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MILEGVYPSFLKGVSQQTPQERSDGQLGAQLNLLSDAVTGLRRRGGVKFQAKLSGIPNSSYIRLIDINGVNYIMIVDTVTGTLKIYNFNGSLIKAHQTDYLKASNGKTSIRSTVSRNNCFILNTEQVITKTPTGGTNPTPNPSTMGYISIRSGQFSKMYSVDIKSGAYTLSFSVGTSGSTASQATPEWVATEMENNIKADATLNARYDVVREGSTVALKAKSATDTNLLVIESGTGSTYIQTSNSSRVQGKQDIIANLPNILDKYIIAVGTVGNSAYYQYNATTSTWKECGVYEAPYKFTNEPIYWYFDDTDAVQVKSLDIQPRAAGDDDNNPLPKFVDFGITGISAYQSRLVLLSGSYVNMSATADFNVYMRTSVEELQDDDPIEVSSTALSSAQFEYAVPYNKDLVLLAQNQQAVIPANSTVLTPKTAVIYPSSKANISMASEPQVVSRSLYYTYQRGTDYYQVGEMIPNAYSDAQYYAQNLADHIPLYATGVCTSITGSTTDNMAVFSSDQKELLVHQYLWAGEDRPLMSFHKWELPYDVLHVQFLQEYLVLFMDVGDDLVVGTINVQLNQLDNKPIPFLDIYQYVDIVDGEGTLPEFLPTGELVAAVYSSETMRHAKVQYEIEGTKIKCQFNGRIYLGVPYESSLTLTPPFVKDDKGRVVAGSNSTVVDLTMTFKSTGEFEYHVSDTYGDVFDGETSAQAWSEAQLGYTRVNTVSDVKFSCGTLLSSTEFSIRTTGTTELNIISASYNIRVPNRGRRRL
Physico‐chemical
properties
protein length:763 AA
molecular weight: 84055,17630 Da
isoelectric point:4,93592
aromaticity:0,10092
hydropathy:-0,23329

Domains

Domains [InterPro]
DC_0058
STR
1–763
DC_0058
IPR058003
TTP
7–761
IPR058003
YP_009813434.1
1 763
Architecture
STR
STR 1-763
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009813434.1
1 763
Domain Start End Length (AA) Confidence
N-terminal 1 131 131 0,9805
Central domain 132 330 200 0,1369
C-terminal 331 763 432 0,2159
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-131
Central
132-330
C-terminal
331-763

Taxonomy

  Name Taxonomy ID Lineage
Phage Acinetobacter phage vB_AbaP_46-62_Aci07
[NCBI] 		2315468 Uroviricota > Caudoviricetes > Autographivirales > Beijerinckvirinae > Friunavirus
Host Acinetobacter baumannii
[NCBI] 		470 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Moraxellales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009813434.1 [NCBI]
Genbank nucleotide accession
NC_048076 [NCBI]
CDS location
range 27044 -> 29335
strand +
CDS
ATGATTCTTGAGGGAGTGTACCCGTCATTCTTGAAAGGTGTATCACAGCAAACACCTCAAGAGCGTAGTGACGGACAATTAGGCGCACAGCTTAATTTATTATCTGATGCTGTAACAGGTTTACGTAGACGTGGTGGGGTTAAATTCCAAGCCAAGTTATCAGGTATTCCTAATAGTAGTTATATACGTTTAATTGACATCAATGGTGTTAATTACATTATGATCGTAGATACTGTTACAGGTACTTTAAAGATTTATAATTTTAATGGTTCCTTAATTAAAGCACATCAAACAGATTACCTTAAGGCTTCCAATGGTAAGACTAGTATACGTAGCACAGTCTCCCGTAATAATTGTTTTATATTAAACACTGAACAAGTTATTACTAAGACACCTACAGGAGGTACTAACCCAACACCTAATCCAAGTACAATGGGTTATATCAGTATTCGTTCTGGTCAATTCTCCAAGATGTATTCGGTAGACATTAAGTCAGGTGCTTATACCTTGAGCTTTAGTGTTGGCACGTCAGGTAGTACGGCATCTCAGGCTACTCCTGAATGGGTAGCTACTGAAATGGAGAATAATATCAAAGCAGACGCTACTCTTAACGCACGTTATGACGTTGTACGGGAAGGTAGTACAGTTGCACTTAAAGCTAAGTCTGCTACAGATACAAACTTGCTAGTGATTGAGTCTGGTACAGGAAGTACTTATATTCAGACGAGTAACTCTAGTCGTGTACAAGGTAAACAGGACATCATTGCTAACCTACCTAATATTTTAGATAAGTATATTATTGCAGTAGGTACAGTAGGTAACTCCGCTTACTATCAATATAATGCCACTACAAGTACTTGGAAAGAATGTGGTGTATATGAAGCACCGTATAAGTTTACTAACGAACCTATTTACTGGTACTTTGATGATACGGACGCTGTGCAAGTTAAAAGCTTAGATATTCAACCCCGTGCAGCAGGTGATGACGATAATAACCCATTACCTAAGTTTGTGGATTTTGGTATTACAGGTATTAGTGCATATCAATCACGTTTAGTACTACTTAGTGGTTCGTATGTTAATATGAGCGCTACAGCAGACTTTAATGTATATATGCGTACCTCTGTAGAGGAATTACAGGATGATGACCCTATAGAAGTATCTAGTACTGCTTTAAGCTCTGCACAGTTTGAATATGCCGTTCCGTATAATAAAGATTTAGTTTTATTAGCTCAGAATCAACAAGCTGTTATCCCTGCCAACAGTACTGTACTTACACCTAAGACGGCTGTTATCTACCCAAGTTCAAAAGCTAACATTAGTATGGCTAGCGAACCACAGGTCGTATCACGTAGTTTGTATTATACATACCAGCGTGGTACAGATTACTATCAAGTTGGTGAGATGATCCCTAATGCTTACTCGGATGCACAGTACTATGCACAGAACTTAGCAGACCATATCCCGTTATATGCCACAGGTGTTTGTACTTCAATCACAGGTAGTACAACAGATAATATGGCGGTATTTAGTTCGGACCAGAAAGAATTACTTGTACATCAGTACTTATGGGCAGGTGAGGACCGCCCGTTAATGAGCTTCCACAAGTGGGAGTTACCTTATGATGTGCTTCATGTACAATTCTTGCAAGAGTATTTAGTATTGTTTATGGATGTGGGTGATGATTTAGTGGTTGGTACTATTAATGTACAGTTAAACCAGCTAGACAATAAACCTATCCCATTCTTAGACATTTACCAATACGTAGATATTGTAGACGGGGAAGGTACATTACCTGAGTTCTTACCAACAGGTGAATTAGTAGCTGCGGTGTACAGTTCTGAGACTATGCGTCATGCTAAGGTTCAATATGAAATTGAAGGTACTAAGATTAAATGTCAATTCAATGGACGTATTTATCTAGGTGTACCTTATGAAAGTTCACTCACACTAACACCGCCTTTTGTTAAAGACGATAAAGGTCGAGTAGTTGCTGGAAGTAATAGTACAGTAGTTGATCTTACTATGACCTTCAAAAGTACAGGTGAGTTTGAGTACCATGTTTCTGATACTTACGGTGATGTGTTTGATGGTGAGACATCCGCACAGGCTTGGTCGGAGGCACAACTAGGGTATACGCGAGTAAATACAGTTAGTGATGTTAAGTTCTCTTGTGGTACATTATTAAGTTCAACAGAGTTTAGTATTAGGACTACAGGCACAACTGAACTAAATATCATTAGTGCTAGTTACAATATCCGTGTACCAAACAGAGGACGGAGACGTTTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ef6caa4c950273c0180154e17b2588df0d3c75c0f4fbd33021ac1b042e9bb791
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8584
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of five Acinetobacter baumannii phages from Abidjan, Cote d'Ivoire Essoh,C., Vernadet,J.-P., Vergnaud,G., Resch,G. and Pourcel,C. 2019-01-03 — GenBank