Protein

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Genbank accession
YP_009838558.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence RBPdetect
Probability 0,62
Protein sequence
MSIDNRSVDEWGSKVYDLPFSLYLYYLNSELDSDGTNSAVLSNMTGLISVNYTPFLNPSDLDLYKIPYDYERFDKINSDIPPLTKACDVYRISNLHGGTKKLADFSAYPIVNKSIGGARSWVNESKLLNYPYSRIEINDGINPPLVLRPELCPYEAELWVKHSLSDRCSYGLYVKGYKGDLGGNVEALVSGDGTELPSTTSQWANWIATSKNQTTQNVNNAIAQSRLGEQFSVRSGELGMLTDGIGAIGGVLSSAMMGNVGGAVMGGIQGVGQYFQNKMSIEQAKAQGQMDRQQTIQSALAQAKDMRTAPNTLISQGSNIMYGLFNNNRYIRLYRFGITDEYAQRIGDYFALYGYKQNKMMIPDTRSRINYNYVKLLQCNIMASDIPQSHLDELKAIYEKGVRIWHVDNYPEVIVGDYSKDNAERF
Physico‐chemical
properties
protein length:426 AA
molecular weight: 47651,14050 Da
isoelectric point:5,55626
aromaticity:0,10563
hydropathy:-0,39061

Domains

Domains [InterPro]
DC_0687
ATT
1–104
DC_0687 IPR048710
IPR048710
STR
123–410
IPR048710
YP_009838558.1
1 426
Architecture
ATT
STR
ATT 1-104 | STR 105-422 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009838558.1
1 426
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,6919
Central domain 11 209 200 0,8312
C-terminal 210 426 216 0,1970
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-209
C-terminal
210-426

Taxonomy

  Name Taxonomy ID Lineage
Phage Clostridium phage susfortuna
[NCBI] 		2316154 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Clostridium perfringens
[NCBI] 		1502 cellular organisms > Bacteria > Bacillati > Bacillota > Clostridia > Eubacteriales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009838558.1 [NCBI]
Genbank nucleotide accession
NC_048712 [NCBI]
CDS location
range 12809 -> 14089
strand -
CDS
ATGAGTATTGATAATAGGAGTGTTGACGAATGGGGTTCAAAAGTTTATGATTTACCATTTTCACTATATCTATATTATTTAAATAGTGAACTTGATTCAGATGGGACTAATTCAGCGGTTTTATCTAATATGACGGGTTTAATATCTGTCAACTATACACCGTTTTTAAATCCTAGTGATTTAGATTTATATAAAATTCCATATGACTATGAAAGGTTTGATAAAATCAATTCCGATATACCACCTCTTACTAAGGCATGTGACGTTTATAGAATATCAAATTTACATGGTGGGACTAAAAAATTAGCGGATTTTAGTGCTTATCCTATAGTTAACAAATCAATAGGTGGGGCGAGAAGTTGGGTAAATGAAAGTAAATTATTAAATTACCCATACTCAAGAATAGAGATAAATGATGGCATCAATCCCCCGCTAGTTTTAAGACCCGAACTTTGTCCATATGAGGCTGAATTGTGGGTAAAACATTCATTATCAGACCGTTGTTCATATGGGTTATATGTTAAAGGTTATAAGGGTGATTTAGGTGGAAATGTTGAGGCATTAGTTAGCGGAGATGGTACTGAACTACCTTCTACTACTAGTCAATGGGCTAACTGGATAGCAACAAGTAAAAATCAAACTACACAAAATGTTAACAATGCTATAGCACAAAGTAGATTAGGTGAACAATTTTCCGTAAGAAGTGGAGAATTAGGGATGTTAACAGATGGAATTGGAGCAATTGGTGGAGTTTTAAGTTCTGCTATGATGGGAAATGTTGGCGGAGCGGTTATGGGTGGAATACAAGGAGTAGGTCAATATTTTCAAAATAAAATGAGTATTGAACAAGCTAAAGCACAGGGACAGATGGACAGGCAACAAACAATCCAATCAGCTTTAGCACAAGCCAAAGATATGAGAACCGCACCAAACACATTAATTTCTCAAGGTTCTAATATAATGTATGGATTATTTAATAATAATAGATATATTAGACTATATAGGTTTGGAATTACAGACGAATACGCTCAAAGAATAGGGGATTATTTTGCTTTATATGGTTATAAGCAAAATAAAATGATGATACCGGATACTAGAAGTAGAATAAATTATAATTATGTTAAATTACTTCAATGTAATATTATGGCTAGTGATATACCACAATCGCATTTAGATGAATTAAAAGCTATTTACGAAAAAGGTGTTAGAATATGGCATGTTGACAACTATCCCGAGGTTATCGTGGGGGATTATTCAAAAGATAATGCCGAAAGATTTTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
d96b96fb30a63ba583b79c2c5af0217478f3bf6e19097c5447c617fe10ca830f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,3452
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Novel Clostridium perfringens phage susfortuna Kot,W., Ploeger,M., Pedersen,J. and Hansen,L.H. 2020-12-01 — GenBank