Protein

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Genbank accession
AUR82848.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,85
TF
Evidence RBPdetect2
Probability 0,69
Protein sequence
MSIFLSAVIQAPEVDSGTGNVTVAPTESGGDLNLNDSTGTPQIVISDSTTTIGSGVVSVSDSTNELTVNSTQPVNSVVTTFTHATADPDNKLATVGAITSFFDSQVSGVLGYADFETKAAFDAFLLTDPMDATIVLVTDSVAFDYTDTKGGANAGVTWWLGICEHFAGEDLVTSTLFTSNSQGALTGPEIKAALFAESDCNNYDDSAKAIVDAVTSNLSGKVDVVAGKDLSTNDYSNAAKSKVDNAPNDTNTALAAKADVSGQVFAGVVQANTFGTTSTNADQAIAIGNGGANDTGNSGLAWRVGTSTTARSGNYRAQMRMNYDNDKWEFRTGNSSNVNSMGVALSIDSGQQVLVNGSPVLTELTGLTTAADSEIINASLSISNPGSGNGYLEFNNSTASADQRAYRLYATSAESLRIETVDGSGTSVNRYTFGHNGDLELPGNIEVAGYISMFDAGGHEHRLERGGDGIALRALLNPADGESIFSIQSSGNSMRLNVPHIGDITTSNNGIRVGTDSNGSNGRVVLEEGNWALIQSAIGYSGTPFPALTATDMVDWSGREVTFTGVGAVSLTMPAIVTGTPTGSQIKAGETMTLHNFNSGSSITVNAASGQKMVNGDSGNVSGTGGSITILAGNSVRMIASDESGVAAVDAICWLVRPFG
Physico‐chemical
properties
protein length:660 AA
molecular weight: 67858,48990 Da
isoelectric point:4,28040
aromaticity:0,06212
hydropathy:-0,09333

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUR82848.1
1 660
Domain Start End Length (AA) Confidence
N-terminal 1 31 31 0,9353
Central domain 32 249 219 0,0554
C-terminal 250 660 410 0,9355
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-31
Central
32-249
C-terminal
250-660

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.029.O._10N.261.55.A7
[NCBI] 		1881381 No lineage information
Host Vibrio sp.
[NCBI] 		678 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR82848.1 [NCBI]
Genbank nucleotide accession
MG592413 [NCBI]
CDS location
range 8597 -> 10579
strand +
CDS
ATGTCTATCTTCTTGAGCGCGGTAATACAGGCTCCAGAGGTGGATTCGGGTACGGGCAATGTGACAGTTGCCCCTACTGAGTCGGGCGGGGATTTAAACCTAAACGACTCAACCGGAACACCTCAAATTGTCATTAGTGACAGTACGACAACCATCGGCTCTGGCGTTGTTTCAGTATCAGACTCAACTAATGAACTAACGGTTAATTCGACACAGCCCGTCAACTCTGTTGTTACCACATTCACACATGCTACAGCCGACCCAGATAATAAACTGGCAACAGTTGGCGCTATTACTTCGTTCTTTGATTCGCAGGTATCGGGTGTTTTGGGGTATGCAGACTTTGAAACTAAAGCGGCGTTTGATGCGTTTCTATTAACTGATCCGATGGATGCGACCATTGTTCTAGTCACTGATTCAGTAGCGTTTGACTACACAGACACTAAAGGCGGCGCAAATGCAGGGGTTACATGGTGGCTTGGAATTTGTGAGCACTTTGCCGGTGAAGATCTTGTTACATCAACTCTGTTTACAAGTAATTCTCAGGGTGCTTTAACGGGCCCAGAGATTAAAGCGGCTCTATTTGCTGAGTCAGACTGTAACAACTACGACGATTCGGCAAAGGCTATTGTTGATGCTGTAACGTCTAACCTTTCTGGTAAAGTTGATGTTGTTGCAGGTAAAGATCTATCGACTAACGACTATTCAAATGCCGCAAAGTCTAAAGTTGATAACGCGCCAAACGACACAAACACAGCACTTGCAGCAAAGGCTGACGTCTCAGGGCAAGTATTTGCCGGGGTAGTTCAGGCAAATACCTTCGGCACAACATCAACCAATGCAGACCAAGCAATTGCAATTGGAAATGGTGGTGCTAATGATACAGGGAATAGTGGTTTAGCTTGGAGGGTCGGGACGTCCACGACTGCTAGATCTGGAAACTATCGCGCTCAAATGAGAATGAACTACGACAACGACAAGTGGGAGTTCAGAACAGGCAATAGCTCTAACGTTAATAGCATGGGTGTAGCGCTATCTATTGATTCAGGTCAGCAGGTGCTAGTTAATGGAAGCCCTGTTTTAACCGAGCTTACGGGTCTAACTACAGCGGCAGATAGTGAAATTATAAACGCTAGCCTATCAATTTCTAACCCCGGATCTGGCAATGGGTATTTAGAGTTTAACAACTCAACAGCAAGTGCCGACCAAAGAGCCTACAGATTATACGCAACATCCGCAGAATCATTAAGGATTGAGACTGTTGATGGGTCTGGAACCTCTGTAAATCGGTACACATTCGGTCATAACGGCGATTTGGAGCTGCCGGGCAATATTGAAGTTGCAGGCTACATTAGCATGTTTGACGCTGGAGGGCACGAACACCGACTTGAGCGCGGCGGTGATGGTATCGCACTAAGAGCACTGTTAAATCCTGCGGATGGTGAGAGTATTTTCTCTATCCAATCGTCGGGAAACTCGATGCGGTTAAACGTTCCGCATATCGGGGACATTACGACATCAAACAATGGGATTCGGGTTGGCACTGATTCCAATGGGTCTAATGGTCGCGTAGTTCTTGAGGAGGGTAACTGGGCGCTAATTCAATCAGCTATTGGATACTCTGGTACACCATTCCCAGCATTAACCGCTACTGACATGGTGGACTGGTCAGGTAGGGAGGTTACCTTCACTGGCGTTGGAGCTGTATCATTAACAATGCCTGCAATTGTCACTGGAACACCTACTGGGTCACAAATTAAAGCCGGCGAAACCATGACCCTGCATAACTTCAATAGTGGCTCTAGTATAACTGTTAACGCTGCATCAGGTCAGAAAATGGTAAACGGTGATAGCGGGAATGTGTCAGGTACAGGTGGAAGCATCACTATACTGGCAGGTAACAGCGTTCGCATGATTGCGTCAGATGAAAGCGGAGTTGCTGCTGTCGATGCCATTTGCTGGCTTGTAAGGCCTTTCGGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
936e8f2d85d0034857c5d8cacae89ee34f6eac44c3394fb66f7df279836d6189
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5970
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank