Protein

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Genbank accession
YP_010774214.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,88
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MGKGGGGKARTPVEDKDTIESSQMISVIDLWSEGQIYGLVDGLKSVRLDNTAVVAEDGSVNIPGVDISYNLGTEDQDYLDGFPQNASEISVGVEVKQSAPVIRTITDPRIDMLRINLYSRALFVITNDGDTKRTDLKMRVETRKGSEPWEVKARIDFIDQKSRNEFSFKAEIWDLPATPFDVRVVRETSDDQTGDFQQIQNSSFWRSYSQVINQKYRWPLTAYMGLKFDSKSFEGAIPRRNYIVRGMIVKVPSNYDPETRKYNGFWNGQFKAAYTNNPAWIVYDIIKNPRYGLGRRGINVEETEMYKAAQWCDQLVPDGRGGMEPRVTCNCYITEQRNAWDLITDIMSCFRAMPLWNGQQFVPSLDIAKDVVATYNNSNVINGTFEYSASSMEDRHSVIEVRYANKANNYEQDTVQITDDLMIEQYGWNVLKVEAFGTDTESQAYRFGSYLLETERLERKTVSFSTGAEGLRNLPGDVIAVADSRQYGRIIGGRILSVSEDRKSIEIDDEVEIPNNAETIIIVIGDDRKPVELLCTNNPGNAKVLNFSTTCPESLGRLSPWSLKINNSGLKLWRCVSVKENDDGTYAINCVEHVPEKNEIVDNGVKFNPPEETLYGNNLPPVENISVEAVVENPNANVRVYWDAPRTARQIRYNVRIYRSGNLVTNQNIDNPSFSFMADTAGTYRAEIRCLGSDGKLGDSVDVVFVIAEPSMPSDVSWRASNFTVTLRPIPGGLVTIGEVYEWFIGSTEQEVLAMNNNLGEAFVLNQVGLKPNTEYWFGVRAVNMIGRSAIKTVLTKTAFETESLEGLIDVALPKTDYIKEMNKDIEGLGELASLRVVDKNGGRPRVTGVYLNAGDAGNNIASVIDFVADAVSISSPDTLERWVYFDSTNRRLVLGGEIQAVSGRLKNVVIEENCVIEGKLSVANIEGYAMEGQSYEFNISNTGGSKTINYGGNAKIPVRLFGQVWARQHKNQKTRVTVNGKTINQMEVSVIVNNNGTVTTRTYTWLYTFVVDLSINQGAEIFVSAGSLDQGNSESSTYRTQFWIAPQSNGFTSN
Physico‐chemical
properties
protein length:1055 AA
molecular weight: 117785,70230 Da
isoelectric point:4,95496
aromaticity:0,09194
hydropathy:-0,37573

Domains

Domains [InterPro]
DC_0323
STR
1–1036
DC_0323
IPR053171
Unmapped
3–793
IPR053171
IPR055385
ATT
87–213
IPR055385 IPR032876 IPR055383 IPR003961
IPR003961
STR
619–695
IPR003961 IPR003961
IPR013783
STR
620–803
IPR013783
IPR036116
STR
632–796
IPR036116
IPR057587
ATT
712–802
IPR057587
YP_010774214.1
1 1055
Architecture
STR
ATT
STR
ATT
STR
ATT
STR
STR 1-86 | ATT 87-213 | STR 214-333 | ATT 334-498 | STR 499-711 | ATT 712-802 | STR 803-1036 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010774214.1
1 1055
Domain Start End Length (AA) Confidence
N-terminal 1 501 501 0,8524
Central domain 502 917 417 0,0515
C-terminal 918 1055 137 0,9064
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-501
Central
502-917
C-terminal
918-1055

Taxonomy

  Name Taxonomy ID Lineage
Phage Serratia phage vB_SmaS_Stoker
[NCBI] 		2902692 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010774214.1 [NCBI]
Genbank nucleotide accession
NC_074753.1 [NCBI]
CDS location
range 21306 -> 24473
strand +
CDS
ATGGGAAAAGGTGGAGGCGGTAAGGCAAGAACACCCGTCGAAGACAAAGACACCATCGAGTCTAGTCAGATGATTTCTGTAATTGACCTCTGGTCAGAGGGTCAGATTTACGGACTTGTTGACGGACTTAAAAGTGTTCGCCTTGATAATACTGCGGTAGTTGCTGAAGACGGTTCAGTAAATATCCCCGGTGTTGATATTTCATATAACCTTGGGACGGAAGACCAAGATTATTTAGATGGCTTTCCGCAAAACGCTTCGGAAATAAGCGTTGGAGTTGAGGTAAAGCAGTCGGCTCCTGTAATTAGAACCATTACAGACCCGCGCATAGATATGCTTCGCATAAATCTCTATAGCCGTGCTTTGTTCGTAATAACCAATGACGGCGACACGAAGCGCACTGATTTAAAGATGCGAGTAGAAACAAGAAAAGGCTCTGAGCCTTGGGAAGTTAAAGCGCGCATTGATTTCATAGACCAGAAATCAAGAAACGAGTTTTCTTTCAAGGCTGAAATATGGGATTTACCGGCGACGCCATTTGACGTGCGAGTAGTTCGCGAAACGTCAGACGACCAGACCGGCGATTTCCAGCAGATTCAAAACTCGTCTTTCTGGCGTTCGTATTCTCAGGTAATTAACCAAAAATACCGCTGGCCTTTAACTGCGTATATGGGTCTTAAATTCGACTCGAAATCATTCGAGGGCGCAATACCAAGAAGAAATTATATTGTACGCGGGATGATTGTCAAGGTTCCATCAAACTATGACCCGGAAACCAGGAAATATAACGGTTTCTGGAATGGTCAATTTAAGGCGGCTTATACAAATAACCCTGCGTGGATTGTTTACGACATTATCAAAAACCCTAGATACGGCCTTGGGCGTCGTGGAATTAACGTTGAAGAAACTGAAATGTATAAAGCCGCGCAATGGTGTGACCAGCTAGTGCCTGACGGTCGTGGTGGAATGGAGCCGCGAGTTACATGTAATTGCTATATCACTGAACAGAGAAACGCCTGGGACTTGATAACCGACATAATGAGCTGCTTCCGTGCTATGCCGTTATGGAACGGACAGCAATTTGTTCCGTCTCTTGATATTGCAAAAGACGTTGTCGCGACATATAACAATTCAAACGTAATTAACGGCACGTTTGAATATAGCGCATCTTCTATGGAAGACCGTCACTCAGTTATAGAGGTTCGTTACGCGAATAAGGCCAACAACTACGAACAGGATACAGTTCAAATAACTGATGACCTGATGATAGAACAATACGGATGGAACGTGCTGAAGGTTGAGGCCTTTGGTACTGATACCGAATCACAGGCTTATCGATTTGGCTCTTATCTGCTGGAAACTGAAAGACTGGAAAGAAAAACGGTTTCATTCTCAACTGGCGCAGAGGGTTTAAGGAATCTTCCTGGCGACGTAATAGCTGTTGCTGATTCACGCCAGTATGGCAGGATTATTGGAGGCAGGATTCTGTCTGTATCCGAAGACAGAAAGAGCATTGAGATTGATGATGAAGTTGAAATCCCAAACAACGCAGAAACTATAATTATAGTTATCGGCGATGACAGAAAGCCAGTTGAGCTTTTATGCACTAACAATCCTGGCAACGCTAAGGTTTTGAATTTTTCCACCACTTGCCCCGAAAGTTTGGGTCGCTTGTCTCCTTGGTCGTTAAAAATAAATAACAGCGGTCTGAAGCTTTGGCGATGCGTTAGCGTTAAGGAAAACGACGATGGGACTTACGCCATTAACTGCGTTGAGCACGTTCCTGAAAAAAACGAAATTGTAGATAACGGCGTAAAATTTAACCCTCCTGAAGAAACTTTGTATGGTAACAACCTGCCGCCAGTTGAGAATATCAGCGTTGAGGCTGTAGTAGAAAACCCTAACGCAAACGTTCGAGTTTATTGGGATGCACCAAGAACGGCGAGGCAAATTCGCTACAACGTTAGAATCTATCGCTCTGGTAATTTGGTCACAAACCAAAATATCGATAATCCATCATTTTCTTTCATGGCGGATACGGCGGGAACATACCGCGCGGAAATTCGCTGCCTCGGCTCTGATGGGAAACTAGGTGATAGCGTTGATGTTGTTTTTGTCATTGCTGAACCCTCAATGCCGTCAGATGTTTCATGGCGCGCATCAAACTTCACGGTTACGTTAAGGCCAATTCCTGGAGGACTGGTTACTATAGGTGAGGTTTACGAGTGGTTTATAGGCTCAACCGAGCAAGAAGTTTTGGCTATGAATAACAATCTTGGCGAAGCGTTCGTTTTAAACCAGGTTGGATTAAAGCCAAATACTGAATATTGGTTCGGTGTTCGAGCTGTAAACATGATTGGCCGCTCGGCGATAAAAACGGTATTGACGAAAACGGCGTTCGAAACCGAATCACTTGAAGGTCTTATTGATGTTGCGCTGCCTAAGACTGACTACATCAAGGAAATGAACAAAGACATAGAGGGTCTTGGAGAGCTTGCGTCTCTTAGGGTTGTTGACAAGAACGGCGGAAGGCCTCGCGTAACTGGTGTTTATCTAAACGCTGGTGATGCAGGAAACAACATAGCTTCGGTGATTGATTTTGTAGCTGATGCCGTCTCAATCTCAAGTCCTGACACGCTAGAGCGCTGGGTGTACTTTGATTCAACCAACAGACGTTTGGTGCTTGGTGGTGAGATACAGGCGGTTTCTGGTCGACTGAAAAACGTTGTCATAGAAGAAAACTGCGTCATAGAAGGAAAGTTGTCAGTGGCGAACATCGAAGGCTATGCGATGGAGGGGCAAAGCTACGAGTTCAACATAAGCAACACTGGAGGGAGTAAGACCATAAACTACGGAGGGAACGCAAAGATACCTGTTAGGCTGTTCGGCCAAGTGTGGGCTAGACAGCACAAAAACCAAAAGACTAGGGTAACGGTAAACGGAAAAACCATAAACCAAATGGAGGTATCAGTTATCGTTAACAACAACGGCACGGTGACGACCAGGACTTACACCTGGCTTTATACGTTTGTTGTTGACCTGAGCATAAACCAGGGGGCTGAAATCTTCGTCAGCGCCGGGTCGCTAGACCAGGGCAACAGCGAATCCTCAACATACAGGACGCAGTTTTGGATTGCCCCCCAATCCAATGGATTCACCTCTAACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
1f17bc8defb5eae6f35ddf655594744a3a617d669283f61b46b9ac12e89e4d2d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8113
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50