Protein

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Genbank accession
QEQ95114.1 [GenBank]
Protein name
tail assembly protein
RBP type
TSP
Evidence DepoScope
Probability 0,68
Protein sequence
MATVKAYNSSFWVQLIPDPPTPTARPYVFGPGVNHVSKGSVQQPLDPTTGKTVKKYGSFWELFQNSVFVTPSTIALGVTADSSTWEIEMWHTHLGVVTISDIVKTGARGMTLSRQGGGVQDTLPWNGYVKYNLHIGLQTDTTIEANFTWSLSPSMRGATVKVTGSRVVPWPYLPSGEYTETREWLTDVIRTRKKEQRLSLRRGPRKTVSQAYQLSDTDLSNMWSHSRVWVNQTYAVPNWNKYVRVGPITKGVTELTFNNVQEKGFTASGFAFIYDNNETYEVRPIKGVTTTKLTFVDGVSRAYNDATVVVIELQKHEHPIQISRTAYGVSRADVTWEVVDDTKNASNLYPLYSGKPVVIDRVVMGGTSQSEQFGYDIDRIDNKVGLYTDFQEYDWESRTRAQLRWSCDTETEFEAVRNFLDFCRGKQGEFWVPTWNRDFLLHDNISAGTLLAVKPTTAALFFKDFHMMIQLVDGTRRFVKATAASKGTTHDSFTVTPSMPDILMTDVEFICRINLMRFDTDRFEFQRKPTGVIDIAAPIISVPEV
Physico‐chemical
properties
protein length:545 AA
molecular weight: 61618,92020 Da
isoelectric point:7,15787
aromaticity:0,11376
hydropathy:-0,33083

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QEQ95114.1
1 545
Domain Start End Length (AA) Confidence
N-terminal 1 544 544 0,5620
Central domain 545 544 1 0,2389
C-terminal 545 545 0 0,0000
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-544
Central
545-544
C-terminal
545-545

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage vB_VpS_BA3
[NCBI] 		2608283 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QEQ95114.1 [NCBI]
Genbank nucleotide accession
MN175679 [NCBI]
CDS location
range 27823 -> 29460
strand -
CDS
ATGGCAACAGTTAAGGCGTATAATTCGTCCTTTTGGGTTCAGTTAATTCCAGACCCGCCAACCCCAACTGCAAGACCTTACGTGTTCGGTCCTGGGGTTAACCATGTTAGCAAGGGGTCTGTTCAGCAACCCCTTGACCCAACAACTGGTAAAACAGTTAAGAAATACGGGTCGTTCTGGGAGTTGTTCCAAAACAGTGTCTTTGTAACACCTTCGACAATTGCGTTGGGGGTTACCGCGGATAGTAGCACTTGGGAAATTGAAATGTGGCACACCCATCTAGGGGTTGTTACAATTTCAGATATTGTCAAGACTGGTGCTCGTGGGATGACGTTGAGCCGACAAGGTGGTGGTGTGCAAGATACACTACCATGGAACGGTTATGTGAAGTACAATCTCCACATTGGACTACAGACAGACACAACTATTGAAGCGAACTTCACTTGGTCGTTAAGTCCTTCGATGCGCGGTGCAACGGTTAAGGTTACGGGTTCCCGAGTTGTTCCGTGGCCTTACCTACCTAGCGGTGAGTATACCGAAACACGCGAATGGCTTACTGATGTTATTCGTACGCGCAAGAAGGAACAGCGTTTGTCTCTGCGTCGAGGACCTCGTAAGACCGTTTCGCAAGCGTACCAACTAAGCGACACAGACCTGAGTAACATGTGGTCACACTCTCGCGTATGGGTTAACCAAACCTATGCAGTTCCAAACTGGAACAAGTACGTGCGCGTCGGCCCTATCACTAAGGGGGTAACAGAACTCACGTTTAACAACGTGCAGGAGAAGGGTTTCACAGCATCGGGTTTCGCGTTTATTTACGACAATAACGAAACTTATGAGGTTCGACCAATTAAAGGTGTGACCACAACTAAGCTAACGTTTGTTGACGGTGTGAGTCGCGCTTACAACGACGCGACCGTTGTTGTTATTGAGTTGCAGAAACACGAGCACCCTATTCAAATTAGCAGAACTGCATATGGTGTGTCGCGTGCGGATGTTACTTGGGAAGTTGTGGACGATACTAAGAACGCGTCTAACCTGTACCCGCTATATAGTGGGAAACCAGTTGTTATTGATCGCGTTGTAATGGGTGGTACTTCTCAAAGCGAGCAGTTCGGTTATGACATTGACCGAATTGACAACAAGGTTGGATTGTACACTGATTTTCAAGAGTACGATTGGGAAAGTCGTACACGCGCTCAGTTACGTTGGTCTTGCGACACGGAAACTGAGTTTGAAGCTGTGCGCAACTTCTTAGACTTCTGTCGCGGTAAGCAGGGTGAATTTTGGGTTCCAACTTGGAATAGAGACTTCCTATTGCACGATAATATTTCTGCGGGGACTCTGTTGGCGGTTAAACCTACAACCGCCGCACTGTTCTTCAAGGATTTCCACATGATGATCCAACTTGTGGACGGGACTCGTAGGTTTGTAAAAGCAACCGCAGCATCTAAGGGTACAACTCACGATAGTTTTACAGTTACCCCTTCAATGCCTGATATTCTAATGACGGATGTTGAATTTATCTGTCGCATTAACCTTATGCGTTTTGATACAGACCGCTTTGAGTTCCAACGTAAACCAACGGGTGTTATTGACATTGCTGCACCTATTATTTCGGTTCCGGAGGTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
5a2974196efce8e41eb530ad22278c680de93335c410873e0512deac96e3eb1e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8437
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Identification and Characterization of Novel Phages vB_VpS_BA3 and vB_VpS_CA8 Lysing Vibrio parahaemolyticus Yang,M. and Liang,Y. 2020-02-21 — GenBank