Protein
View in Explore- Genbank accession
- CAH1094481.1 [GenBank]
- Protein name
- major facilitator family transporter
- RBP type
-
TSP
- Protein sequence
-
MFAAFNILWSALVLPLSAPPYNFSHTVIGSFGLFGVIGALAATRAGQWADRGYAQRTSLAALLILLLAWWPLSLMTYSLWALVIGIVLLDLGGQALHVTNQSMIFRTRPEAHSRLVGLYMLFYAVGSGLGAISTTATYAYAGWLGVCGLGACVSLLALLFWWRTIKL
- Physico‐chemical
properties -
protein length: 167 AA molecular weight: 18069,19100 Da isoelectric point: 9,62154 aromaticity: 0,13772 hydropathy: 0,89222
Domains
Domains [InterPro]
IPR020846
STR
1–167
STR
1–167
PTHR42910
Unmapped
1–164
Unmapped
1–164
IPR036259
STR
1–166
STR
1–166
IPR036259
STR
2–164
STR
2–164
IPR011701
STR
2–163
STR
2–163
1
167
Architecture
STR 1-167
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
167
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 10 | 10 | 0,3192 |
| Central domain | 11 | 156 | 147 | 0,0434 |
| C-terminal | 157 | 167 | 10 | 0,5917 |
Note: Constraints were applied during segmentation.
Sequence started with non-N-terminal domain|N-terminal too short, forced to 10 residues|C-terminal too short, adjusted boundary
Sequence started with non-N-terminal domain|N-terminal too short, forced to 10 residues|C-terminal too short, adjusted boundary
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-10
1-10
Central
11-156
11-156
C-terminal
157-167
157-167
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
Acinetobacter phage MD-2021a [NCBI] |
2899278 | Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes |
| Host | No host information | ||
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
CAH1094481.1
[NCBI]
Genbank nucleotide accession
CAKLQH020000032
[NCBI]
CDS location
range 55 -> 558
strand +
strand +
CDS
ATGTTCGCGGCATTTAATATTCTCTGGAGCGCATTGGTACTACCGTTAAGTGCACCACCCTATAACTTTTCGCATACTGTAATTGGGTCTTTTGGACTGTTCGGTGTAATCGGTGCTCTAGCCGCCACTCGTGCTGGCCAATGGGCCGACCGCGGATATGCTCAGCGCACAAGCTTGGCAGCACTGTTAATATTGCTGCTCGCATGGTGGCCGCTTTCACTCATGACCTACTCACTTTGGGCGCTGGTGATTGGCATAGTATTGCTCGACTTAGGTGGGCAAGCCCTGCATGTGACCAACCAGAGTATGATTTTTCGCACTCGCCCAGAAGCACATAGTCGTCTTGTGGGTCTATACATGCTCTTTTATGCAGTAGGTAGTGGACTGGGTGCAATCAGCACAACAGCGACTTATGCTTATGCAGGATGGCTCGGCGTATGTGGCCTAGGCGCATGTGTGAGTTTATTGGCGTTATTATTTTGGTGGAGAACGATAAAGCTATAA
Genome Context
Genome Context
Tertiary structure
PDB ID
ba0a053654de5792abd39c335482b789601fb67b419088511cc23457f3c02760
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50