Protein

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Genbank accession
YP_009811536.1 [GenBank]
Protein name
putative ILEI domain-containing protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MLQQSCLYARGITPVFSGSPGDGSITAVDAMAVDSSRFTSFVVDGHALSYVCGFGSVYMNGRFVRDGSPLVDANYGWLGNYRNKSINNMGVLRHLLTQRGYNSNITYGSTMLVISDLAPVNDDTAMESWGQLVAYMQRIPLDMLAHSWQEINAGAYGYDGTYKYFKQFSCVMLLLSATNQSMPTQMLTALREAHRNGVSLIVLQKGPYEGNVNFNAIFNPLGIRSNGQAYIAATVAAKNKSINAFGNHVSWTNVVQLHNQINFEVSAAYQFTGTTQAGPGTIGGQPGTWRQFYCGQVDISDDVILDPPLIYRDKCCVEPGSAYQVDFDVTTYPYKPDDWAARMAAGDVSVSWSNENAQSLAARSRIFSHVVGYQRYLDTGDTGYTIFNGTRYTDTRGWNVYKIRKSDLALVERRTFDIHASAEGTNPGVANAQACAAFLNSIGSDHYVYVVSYDTADVNRLQGGLPQAMYRIGASRRVYAGSQYVYRAAYSLFGEPGIGEGNAWNEMYRGAKSSDTDSYFSVGYDFDTNGFPYVTGTDREGNMSMALNGLFENTKSSHLRYYKVLGSQDGASTMGMQHTVTIRDNRFKKLPMYETKTFVVSVTNPCFPVPKIQSHDWVHVVNRANNRYVKYPFKDLCEYLVTTSDGSGQNEMCTSHLMMNWDMFGSIGSGTIYNSAGASHKIYCGTENGNINDPNSLYINTTEEGKVWHIYERKYQLITEEASRDSNDWQVVWKWNGVGTQGHNITIAPGYEYIVFAYDRYGEVELAERHFFVPPTEYLPKWGANYYNRDFSNSTTFTVDRAFRCNAYCEKSKNGGTENGIMMIIRRPLFLTTGAADRTGWECIFNNNSTTMPRGNNYMIPCVKDYQYMVLCTTEDGAVSSHHFNAWKGAFDMVWEGLFEADSGGRASWYQDLQTLMKSGNSGGTTMDCFDGLASPQGVFQVWRRPILCWEPDEIDS
Physico‐chemical
properties
protein length:957 AA
molecular weight: 106885,16400 Da
isoelectric point:5,76986
aromaticity:0,12853
hydropathy:-0,36938

Domains

Domains [InterPro]
DC_0476
STR
1–956
DC_0476
PS52031
LEC
371–535
PS52031
YP_009811536.1
1 957
Architecture
STR
STR 1-956 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009811536.1
1 957
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0411
Central domain 11 220 211 0,9365
C-terminal 221 957 736 0,2565
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-220
C-terminal
221-957

Taxonomy

  Name Taxonomy ID Lineage
Phage Dickeya phage vB_DsoM_AD1
[NCBI] 		2283029 Uroviricota > Caudoviricetes > Alexandravirus >
Host Dickeya solani MK10
[NCBI] 		1224151 Pseudomonadota > Gammaproteobacteria > Enterobacterales > Pectobacteriaceae > Dickeya > Dickeya solani

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009811536.1 [NCBI]
Genbank nucleotide accession
NC_048054 [NCBI]
CDS location
range 66720 -> 69593
strand -
CDS
ATGCTGCAACAAAGCTGCTTGTATGCGCGAGGCATTACGCCTGTATTTAGCGGTAGTCCTGGCGATGGCTCTATTACCGCAGTAGACGCTATGGCAGTTGATAGCTCACGCTTCACCTCTTTTGTTGTTGATGGTCATGCTCTTTCATACGTATGCGGCTTCGGCTCTGTCTACATGAATGGTCGATTCGTCCGTGACGGTAGTCCTCTTGTTGATGCTAACTACGGTTGGCTCGGTAACTACCGCAATAAGAGCATTAACAACATGGGTGTGCTGCGTCACCTGTTGACACAACGCGGCTACAACTCGAACATCACATATGGCAGCACCATGCTTGTCATATCAGACCTTGCACCTGTCAATGATGACACTGCAATGGAGTCGTGGGGACAACTCGTTGCGTATATGCAGCGCATCCCTCTCGACATGCTGGCACATAGCTGGCAAGAGATTAACGCTGGTGCGTATGGTTACGATGGTACGTACAAGTATTTCAAACAGTTCAGTTGCGTAATGCTTCTGCTGTCTGCTACCAACCAGAGTATGCCTACTCAGATGCTTACTGCTCTGCGTGAAGCGCATCGTAATGGTGTTAGCCTGATTGTGTTGCAGAAAGGTCCGTATGAAGGTAACGTAAACTTCAATGCGATCTTCAACCCACTCGGTATTCGCAGCAATGGCCAAGCATATATTGCGGCCACTGTCGCAGCAAAGAACAAAAGCATTAACGCGTTCGGCAACCACGTATCTTGGACTAACGTTGTGCAGTTGCATAACCAAATCAACTTCGAAGTCTCTGCCGCGTATCAGTTCACAGGAACCACTCAAGCAGGTCCAGGTACTATCGGTGGCCAGCCTGGCACATGGCGTCAGTTCTATTGCGGACAGGTTGATATCTCCGATGACGTTATCCTTGACCCGCCTCTTATCTATCGTGATAAGTGCTGCGTCGAACCTGGCTCTGCATATCAGGTAGACTTCGACGTCACAACATATCCATACAAGCCTGACGATTGGGCAGCACGTATGGCTGCGGGTGACGTGTCTGTTAGTTGGTCAAACGAGAATGCTCAATCGCTTGCAGCGCGTAGCCGAATCTTCTCTCACGTTGTAGGCTATCAGCGTTATCTGGACACAGGAGATACAGGCTACACGATCTTTAACGGTACCCGCTACACCGATACTCGTGGCTGGAACGTTTATAAGATTCGTAAGTCTGACCTTGCGCTGGTGGAGCGTCGTACATTTGACATTCACGCATCGGCCGAAGGAACTAACCCAGGCGTTGCGAATGCTCAGGCATGTGCGGCTTTCCTGAACTCTATCGGCTCTGACCATTACGTCTACGTTGTGTCATACGATACAGCCGACGTTAACCGACTGCAGGGCGGTCTGCCTCAAGCCATGTATCGCATCGGTGCATCGCGTCGTGTGTACGCAGGATCGCAATACGTGTATCGTGCTGCATACTCACTGTTCGGTGAGCCTGGTATTGGTGAGGGTAACGCGTGGAATGAAATGTATCGTGGTGCCAAGTCATCTGATACTGACAGTTACTTCTCTGTCGGCTATGACTTCGATACGAATGGCTTCCCATACGTGACAGGCACAGACCGCGAAGGTAACATGAGCATGGCGCTCAATGGCCTGTTCGAAAACACCAAGAGCAGTCATCTGCGCTACTACAAAGTGCTTGGCTCTCAGGATGGTGCTTCGACAATGGGTATGCAGCATACTGTTACGATTAGGGATAACCGTTTCAAGAAGCTGCCTATGTACGAGACAAAGACCTTCGTTGTTTCCGTAACTAACCCATGCTTCCCTGTGCCTAAGATTCAGTCCCACGATTGGGTTCACGTTGTTAACCGTGCGAACAATCGCTACGTTAAATATCCGTTCAAGGACCTCTGTGAATATCTTGTCACAACGTCGGACGGTAGCGGCCAGAACGAAATGTGTACCTCTCACCTGATGATGAATTGGGATATGTTTGGCTCAATCGGGTCCGGCACTATCTATAACTCTGCTGGTGCGTCGCATAAGATTTACTGCGGCACTGAGAACGGGAATATCAATGACCCGAACTCGTTGTACATCAACACCACAGAAGAAGGGAAAGTGTGGCACATCTATGAGCGTAAGTATCAGCTCATTACCGAAGAAGCATCGCGTGATTCGAATGACTGGCAGGTTGTCTGGAAGTGGAACGGGGTTGGTACTCAGGGCCACAACATTACCATTGCGCCTGGCTATGAATACATCGTGTTTGCGTATGATCGCTACGGTGAGGTTGAACTTGCAGAGCGTCATTTCTTCGTACCGCCTACCGAATATCTGCCTAAGTGGGGCGCTAACTATTATAACCGAGACTTCTCGAACTCAACGACGTTCACCGTTGACCGAGCGTTCCGTTGTAATGCGTACTGCGAGAAATCGAAGAATGGCGGTACAGAAAACGGCATCATGATGATCATCCGTCGTCCGCTGTTCCTGACGACAGGCGCTGCTGACCGTACTGGTTGGGAATGTATCTTCAACAATAACAGTACGACAATGCCACGCGGTAACAACTACATGATTCCGTGTGTGAAGGATTATCAGTACATGGTATTGTGTACAACGGAAGACGGTGCTGTTTCTTCTCACCACTTCAATGCGTGGAAAGGCGCTTTCGATATGGTATGGGAAGGATTGTTTGAAGCTGACTCTGGTGGCCGTGCATCTTGGTATCAAGACTTGCAGACGCTGATGAAAAGCGGCAACTCAGGTGGTACAACTATGGATTGCTTCGATGGGCTCGCTAGTCCTCAAGGCGTATTCCAAGTGTGGCGCCGTCCTATCCTGTGCTGGGAGCCAGACGAGATTGACAGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
7f310ee648693bfb2350ef2da2bfe49efab0b4f017593afac8985993c87f1c8d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4163
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Jumbo Bacteriophages Are Represented Within an Increasing Diversity of Environmental Viruses Infecting the Emerging Phytopathogen, Dickeya solani Day,A.W., Ahn,J. and Salmond,G.P.C. 2018 — GenBank