Protein

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Genbank accession
AHK11834.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MADLLSVADLEAAKKHDTFHSEVITGKVGGLAGGANIPTATNAVTGQVQRVLPEVLDSYGFNIAEFTFAEGGILDGKNILIPNSPANSSYYKYIGASAFPLTVNAGTNPVGNADWQSIITTDARFLNNSKITVGSIKSLSVPTVTGQSFSVTGFYAGTTVGGGDFIYDASRDKADHNGGTVIAPEAVAAWDGSQVNLSSLLNWTGAGAGCFARVNYTSLYISYFGGVKGGLDNKLAFDKAALVAVADGNVFEFDDLYAVSGVELNGDHDGLILRGTSSPNEVSDSGDLCGLKPFSDNQDYVISVGQDASTWQGGAFEDFCIYGDNLSVNTAGLVVKRWSQGYGKNLAVRNFKGAGVYFNKGEDLQFDNIRVVKCGTVAGQEGGVVFGPTVDVSNNIIRFIGGRVEWIDGPMVSVSSDTNSAVSHVWFYGTKFEVAERDGYGSTRALNAVFDLSKANVFWRCANINFVDCWVSQAQQAKSVFKIGKSNGITSRGLNMSSPTGGAINLVESVGIVDAKALSIRDSKVINTGGDYTNFNVTTDVSSSSPMDIEYPEIYGGNGFSLSNQINKNIITAAQAGVDGRLERDAESINVSKQVMSLAGQGNSTVCRLSSTRYGTEVKGFDPLKFNQLINVKFRAKKTGTTGLVSLYAGSDYLDRADLTDAWEWYQVGGTLRGRAGQVSLNTNPTSSIDAKIFIDAIEVSYGTTHKIISFGDISGQYDSGDVVELSTAPASGLPYSKLCTVGGNPATFVNMFVIP
Physico‐chemical
properties
protein length:756 AA
molecular weight: 79997,16080 Da
isoelectric point:4,90699
aromaticity:0,09788
hydropathy:-0,06415

Domains

Domains [InterPro]
DC_1709
STR
157–701
DC_1709
IPR011050
STR
242–430
IPR011050
AHK11834.1
1 756
Architecture
STR
STR 157-701 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AHK11834.1
1 756
Domain Start End Length (AA) Confidence
N-terminal 1 232 232 0,9948
Central domain 233 573 342 0,9899
C-terminal 574 756 182 0,9632
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-232
Central
233-573
C-terminal
574-756

Taxonomy

  Name Taxonomy ID Lineage
Phage Shewanella sp. phage 3/49
[NCBI] 		1458863 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Shewanella sp.
[NCBI] 		50422 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Alteromonadales
Host Shewanella sp. 49
[NCBI] 		1386776 Bacteria > Proteobacteria > Gammaproteobacteria > Alteromonadales > Shewanellaceae > Shewanella

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AHK11834.1 [NCBI]
Genbank nucleotide accession
KJ018214.1 [NCBI]
CDS location
range 27252 -> 29522
strand +
CDS
ATGGCAGATTTACTTAGTGTTGCTGACTTAGAAGCAGCAAAGAAGCACGACACATTTCATAGCGAAGTCATCACAGGTAAAGTTGGTGGCTTGGCTGGTGGCGCTAATATACCAACAGCCACAAATGCTGTTACAGGCCAAGTTCAGCGAGTACTGCCAGAGGTGCTTGACTCATACGGATTCAACATTGCTGAGTTTACTTTTGCCGAGGGCGGCATTCTTGACGGAAAGAATATATTAATACCAAACTCCCCCGCCAATTCATCTTACTATAAGTACATTGGAGCGAGCGCTTTCCCGCTAACTGTAAACGCCGGCACGAATCCCGTTGGTAATGCTGATTGGCAATCAATCATAACCACCGACGCTAGATTTTTAAATAACTCAAAGATAACCGTAGGCAGCATCAAAAGCTTATCTGTGCCAACGGTAACTGGTCAATCATTTTCAGTAACAGGCTTCTACGCTGGCACTACGGTCGGTGGCGGTGATTTTATTTATGACGCTAGCAGAGATAAAGCAGATCACAATGGCGGCACTGTAATAGCGCCAGAAGCTGTTGCGGCTTGGGATGGATCGCAGGTTAACTTGTCTTCTTTGCTGAATTGGACTGGGGCTGGTGCTGGGTGTTTTGCTCGGGTTAATTATACAAGTCTATATATTTCATACTTTGGCGGAGTAAAAGGTGGTCTTGATAATAAACTAGCGTTTGATAAAGCTGCTCTAGTCGCAGTTGCTGATGGCAATGTTTTTGAGTTTGACGATTTATATGCTGTAAGTGGTGTTGAGTTGAATGGCGATCACGATGGTTTAATACTGAGAGGGACTAGCTCGCCAAACGAAGTCTCTGACTCTGGTGACTTGTGTGGGCTAAAACCTTTCTCTGACAACCAAGATTATGTAATTTCAGTCGGCCAAGATGCGAGCACTTGGCAGGGTGGGGCGTTTGAAGATTTTTGCATTTACGGCGACAACCTAAGTGTTAATACTGCCGGCTTGGTCGTAAAAAGATGGTCACAAGGCTACGGTAAAAACTTAGCGGTCAGAAACTTCAAAGGTGCAGGCGTTTACTTTAACAAAGGAGAGGATCTACAATTTGACAACATTAGAGTTGTTAAGTGTGGAACTGTAGCTGGACAAGAGGGCGGTGTAGTGTTCGGCCCAACTGTAGACGTATCAAATAACATCATTAGATTTATCGGTGGGAGAGTTGAGTGGATTGATGGTCCTATGGTTTCTGTATCGTCAGATACAAACTCAGCGGTGTCACATGTTTGGTTTTACGGAACTAAATTTGAAGTGGCAGAGCGTGATGGTTACGGCTCGACAAGAGCATTAAATGCTGTTTTTGATTTGTCTAAAGCTAACGTGTTTTGGCGCTGCGCAAATATTAACTTTGTTGATTGTTGGGTGTCGCAAGCGCAACAGGCTAAGTCTGTTTTTAAAATCGGCAAATCAAATGGCATTACATCTCGAGGCTTGAATATGAGTTCGCCTACTGGCGGAGCTATAAATCTAGTTGAAAGCGTTGGTATCGTTGATGCAAAGGCTTTATCAATAAGAGACAGTAAAGTAATAAATACAGGCGGTGATTATACAAACTTTAATGTAACAACTGATGTAAGCTCATCTTCACCAATGGATATAGAATACCCTGAAATATATGGCGGAAATGGGTTTTCATTAAGCAATCAAATAAACAAAAATATAATAACAGCAGCTCAAGCAGGCGTTGACGGCAGGCTTGAGCGTGACGCAGAATCAATTAACGTATCAAAGCAGGTTATGTCGCTGGCAGGTCAGGGTAACTCTACGGTGTGCCGCTTAAGCTCAACTAGATATGGAACTGAGGTGAAAGGATTTGACCCTTTAAAATTCAACCAGTTAATAAACGTTAAATTTAGAGCCAAAAAAACAGGGACAACCGGCTTAGTGTCTTTATATGCCGGCAGCGATTACTTAGACAGGGCAGATCTGACTGATGCGTGGGAGTGGTATCAGGTTGGCGGAACGTTGAGAGGCAGAGCGGGGCAGGTTAGCTTGAACACAAACCCAACAAGTAGTATTGACGCTAAAATATTTATCGATGCTATAGAGGTTAGCTATGGAACAACTCACAAAATAATCAGCTTTGGCGATATAAGCGGTCAGTATGATAGCGGGGATGTAGTTGAGCTATCTACAGCCCCAGCATCAGGACTGCCTTATAGCAAGCTGTGCACTGTAGGCGGCAATCCTGCAACTTTTGTAAACATGTTTGTTATTCCTTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
b75bbf8686226fb914f3c103efb6012b1e5a5ba011dcb65f3ef7bdc0a0b974ff
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7580
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50