Protein

View in Explore
Genbank accession
XDQ99019.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,64
TF
Evidence RBPdetect2
Probability 0,92
Protein sequence
MADLKAGSTVGGLPIWHSGTFPLVPVGNTLTYRGYKVYTENDKPQASNNDFVSKASGGQYLGVVAFKQGLQINATFTGGSDQNGLYSGDGDGATFDKANIDLVSWYGIGIRSSSGTSGRVLVINARNGDVNTKGNITVEKQISITSANPTDGTHATRKSYVDGQISIVTSNANSRVLRAGDTMTGLLTAPQFASTGAASRPEHVPRLDQVITKGTIIDFGSY
Physico‐chemical
properties
protein length:222 AA
molecular weight: 23269,53120 Da
isoelectric point:8,77694
aromaticity:0,07658
hydropathy:-0,27072

Domains

Domains [InterPro]
DC_0466
STR
1–219
DC_0466
IPR005601
STR
60–184
IPR005601
XDQ99019.1
1 222
Architecture
STR
STR 1-219 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XDQ99019.1
1 222
Domain Start End Length (AA) Confidence
N-terminal 1 197 197 0,3042
Central domain 198 211 15 0,0349
C-terminal 212 222 10 0,8666
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-197
Central
198-211
C-terminal
212-222

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage vB_KM5a1-KLB3
[NCBI] 		3129266 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Klebsiella sp. M5a1
[NCBI] 		2759708 Pseudomonadota > Gammaproteobacteria > Enterobacterales > Enterobacteriaceae > Klebsiella >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XDQ99019.1 [NCBI]
Genbank nucleotide accession
PP444687.1 [NCBI]
CDS location
range 8138 -> 8806
strand -
CDS
ATGGCAGATTTAAAAGCTGGTTCTACAGTCGGGGGTTTACCTATTTGGCACTCCGGCACATTTCCGCTGGTTCCGGTTGGTAATACTCTAACCTATCGCGGATATAAGGTTTATACTGAAAACGATAAACCACAAGCATCAAATAACGACTTCGTTTCTAAAGCAAGCGGCGGTCAATATTTGGGTGTAGTTGCCTTCAAACAGGGGCTACAAATTAACGCTACTTTCACTGGCGGAAGTGACCAGAACGGTTTATATTCTGGTGATGGTGATGGTGCGACATTTGATAAGGCCAACATTGATCTTGTATCATGGTATGGTATTGGTATTCGTTCATCTTCCGGAACAAGTGGTCGCGTATTAGTTATCAATGCTAGAAATGGTGATGTAAACACGAAGGGTAATATCACGGTTGAAAAACAAATCAGTATTACTTCTGCGAATCCTACAGATGGAACTCACGCAACGAGAAAAAGTTACGTTGATGGTCAGATAAGTATAGTTACATCAAATGCTAATAGCAGGGTATTACGCGCTGGAGATACAATGACAGGGCTATTAACTGCCCCGCAATTCGCGAGCACAGGCGCGGCTTCCCGTCCCGAACACGTACCACGGCTCGACCAGGTAATTACTAAAGGGACTATCATAGATTTTGGATCTTATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
bc87064d77ba90d9e0b1fa9e33bd90fd495611afa99c6facd048f2fca4501a6e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6821
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of 24 phages infecting the plant-growth-promoting rhizobacterium Klebsiella sp. M5a1 Gittrich,M.R., Sanderson,C.M. and Sullivan,M.B. 2025-02-21 — GenBank