Protein

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Genbank accession
XYR95531.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,60
TF
Evidence RBPdetect2
Probability 0,55
Protein sequence
MSRIRANNIVNGAGTGAPTFPNGAVINGITTITADVATTGNNLTIGTGTTISNPSDNEFRILTNGGERVRVDSSGNVGIGTDNPAVHLDVYGEPPRIRLVRNSTGVRHELRGNADNLSIRADHSNIGADTRIDFQIDGSEKLRILSTGGITFNGDTSVNNALDDYEEGSWTPTYYGASTAGTYTLTSTNAKYTKIGNTVHLYVDIKNINEDSAGTGLLRIGGLPFTPSNGNEAGSVILEAFSFPSTVEYAVLRTSTLNHLTVVGVRNSGVDIQFNVADRDSNTSDIFGQITYMTSA
Physico‐chemical
properties
protein length:296 AA
molecular weight: 31309,98040 Da
isoelectric point:4,98793
aromaticity:0,06419
hydropathy:-0,27736

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XYR95531.1
1 296
Domain Start End Length (AA) Confidence
N-terminal 1 18 18 0,9298
Central domain 19 217 200 0,0817
C-terminal 218 296 78 0,9990
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-18
Central
19-217
C-terminal
218-296

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage RN05-S
[NCBI] 		3412547 Viruses >
Host Synechococcus sp. MW02
[NCBI] 		1620844 Cyanobacteriota > Cyanophyceae > Synechococcales > Synechococcaceae > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYR95531.1 [NCBI]
Genbank nucleotide accession
PV261924.1 [NCBI]
CDS location
range 17376 -> 18266
strand -
CDS
ATGTCTAGAATAAGAGCCAATAACATTGTCAATGGTGCTGGTACTGGAGCTCCTACATTTCCTAATGGTGCGGTTATCAACGGTATCACAACGATTACTGCTGATGTAGCCACCACTGGTAATAATTTGACCATTGGCACTGGAACTACGATTAGTAATCCAAGTGATAATGAGTTTAGAATTCTTACAAATGGTGGTGAGAGAGTTCGTGTAGATTCAAGTGGTAATGTCGGTATCGGGACAGATAATCCAGCAGTTCATCTAGACGTTTATGGAGAGCCTCCACGTATTAGACTCGTTAGGAATTCGACTGGTGTACGACACGAACTTAGAGGTAATGCTGATAATTTATCAATAAGAGCAGACCATTCTAACATTGGTGCTGACACAAGAATTGATTTTCAAATCGACGGAAGTGAAAAACTTCGCATCCTATCAACTGGCGGTATTACTTTCAACGGTGACACATCTGTAAATAATGCACTAGATGATTATGAAGAGGGCAGTTGGACTCCTACTTATTATGGAGCATCAACAGCGGGTACTTATACCTTAACTAGTACTAACGCTAAGTATACTAAAATTGGTAATACAGTACATTTATATGTGGATATAAAAAATATAAACGAAGATTCCGCAGGGACTGGATTATTACGAATTGGTGGATTACCTTTCACACCAAGCAATGGAAATGAAGCAGGTTCTGTAATATTAGAGGCTTTTTCGTTTCCAAGTACTGTAGAGTATGCAGTCTTAAGAACTTCTACTCTTAATCACCTCACCGTCGTAGGTGTTAGAAATAGTGGTGTAGATATTCAATTTAATGTGGCTGATAGAGATAGTAATACCTCTGATATATTTGGACAGATTACTTATATGACCAGTGCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
12306c180cc76d3d288dbdba4aaaae5f68f39ee424a8020b09c0e061d9933535
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8683
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50