Protein

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Genbank accession
CEK40238.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MLNEEARKKILNLPVDTNKRFEDIENLKEVLNLSYITDNGECTIENSKKGYLTNVNIQGKTLVNLSNPNNIIVTEGLRYLNPFKYIEKEKQYTFINLSDKEIYYFHDNIIKFQMNPNSKTLYTIDIDITDTNCLCIAHSVKGWGETDVDKQEFTKSVIILEGDYTTKDISYFEGLQSVGQGNKIEILTTEINTPNLIKSDYIYTQGKYNSLSGEYLDTDDKYYACEEFIEIKGNTEYVFYGLNANRQYYDSNKNFIQGISSPEKYFQLTGNSSWRYWVEKTPSNAHFIKVTLHVDNLINGKAMLFEGNKFDKKIIPYTLRSLPDGTKDEIVYKNNKYYLIKRCEEVILDGDNFNPRTLEDQNNNIVLYVRTDPVPDAKPLEGALGRANTIYCDKFKSVDTTWGNEITTEGIIIDQNRTISFRILKSKLETQDIEGAKKWMRLNPIKVVYPLEIPEEIELTSLDLQQYNSQTRFICETSIIPSINFESTQNLGSHIEVIRNNIKSINNIHSKSVIIDLSNKLLNGWKKTVSDNDGFIISKNGNQVSFHMRITGGIITDSTALLKLPDGFTPKTFYVFPIFTTQNNQLVQGFMYFNFANGYIQITQLGSNKDIYSYGTYFIE
Physico‐chemical
properties
protein length:620 AA
molecular weight: 71398,80230 Da
isoelectric point:5,36903
aromaticity:0,11452
hydropathy:-0,46742

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
CEK40238.1
1 620
Domain Start End Length (AA) Confidence
N-terminal 1 511 511 0,3785
Central domain 512 609 99 0,0015
C-terminal 610 620 10 0,9978
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-511
Central
512-609
C-terminal
610-620

Taxonomy

  Name Taxonomy ID Lineage
Phage Clostridium phage phiCD24-1
[NCBI] 		1582149 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CEK40238.1 [NCBI]
Genbank nucleotide accession
LN681534.1 [NCBI]
CDS location
range 27999 -> 29861
strand +
CDS
TTGTTAAATGAAGAAGCTAGAAAAAAGATATTGAATTTACCAGTTGACACAAATAAAAGATTTGAAGATATAGAGAATTTAAAAGAAGTACTTAATTTGTCTTATATAACAGATAATGGAGAGTGTACAATAGAAAATAGTAAAAAGGGATATTTAACTAATGTTAATATACAAGGTAAGACATTAGTTAATTTATCTAATCCAAATAATATAATTGTAACAGAAGGCTTACGATATTTAAATCCATTTAAGTACATTGAAAAAGAAAAACAATACACTTTTATTAATTTAAGTGATAAAGAGATATATTATTTCCATGACAATATAATTAAGTTTCAGATGAACCCTAATAGTAAAACTTTATACACTATAGACATAGATATAACTGATACTAATTGTCTTTGTATAGCTCACAGTGTAAAAGGTTGGGGAGAAACTGATGTAGATAAACAAGAGTTTACTAAGTCAGTGATAATTTTAGAAGGTGATTATACAACTAAAGATATTTCTTATTTTGAAGGATTACAAAGTGTTGGGCAAGGAAATAAAATTGAAATATTAACAACTGAAATAAATACACCAAATTTAATAAAATCAGATTATATTTATACTCAGGGTAAATATAATAGTCTTAGTGGAGAGTATTTGGATACTGATGATAAATATTATGCTTGTGAAGAATTTATAGAAATAAAGGGAAATACAGAATATGTGTTTTATGGATTGAACGCTAATAGACAATATTATGATTCAAATAAAAATTTCATACAAGGTATATCTTCTCCAGAAAAATATTTCCAATTAACAGGAAATTCAAGTTGGAGATATTGGGTTGAAAAAACACCTAGTAATGCACATTTTATTAAAGTGACATTACATGTAGATAATTTAATAAATGGTAAAGCTATGTTATTTGAAGGAAATAAATTTGATAAAAAGATAATTCCATATACTCTAAGAAGCCTACCTGATGGTACAAAAGATGAAATAGTTTATAAGAATAATAAATATTATTTAATAAAGAGATGTGAAGAAGTAATTCTTGATGGTGATAATTTTAATCCAAGAACATTGGAAGACCAGAACAATAATATTGTACTTTATGTTAGAACTGACCCTGTTCCTGATGCTAAGCCTCTAGAAGGAGCATTGGGTAGGGCTAATACTATATATTGTGATAAATTCAAGAGTGTAGATACGACTTGGGGAAATGAAATTACTACAGAAGGTATAATTATAGACCAAAATAGAACAATTTCTTTTAGAATTTTAAAAAGTAAATTAGAAACACAAGATATTGAAGGGGCTAAGAAATGGATGAGATTAAATCCAATAAAAGTTGTTTATCCATTAGAAATACCAGAAGAAATTGAATTAACATCGCTAGATTTACAACAATACAACAGTCAAACTAGATTTATTTGTGAAACTAGTATTATTCCAAGTATAAATTTTGAAAGTACTCAAAACTTAGGTAGTCATATAGAAGTTATTAGAAATAATATAAAAAGTATCAATAATATACACTCTAAGAGTGTAATTATAGATTTATCTAATAAATTATTGAATGGATGGAAGAAAACTGTTTCAGATAATGATGGGTTTATAATAAGTAAAAATGGAAATCAAGTTAGTTTTCATATGCGTATAACTGGTGGAATAATTACAGATAGTACTGCATTATTAAAGCTTCCTGATGGATTTACACCTAAAACTTTCTATGTTTTTCCAATATTTACAACCCAAAATAATCAATTAGTTCAAGGCTTTATGTATTTTAATTTTGCAAATGGATACATTCAAATTACACAATTAGGAAGTAATAAAGATATATATAGTTATGGAACTTATTTTATTGAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
24cbe1a241082aa1b94db1252e3c814430d7aacf171c664f7473ca2bb6977d1e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6987
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Whole Genome Sequence and Molecular Characterization of Siphoviridae / Myoviridae Phage Infecting Clostridium difficile Monot,M. 2011-08-01 — GenBank